Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lbx1P52955 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.58■□□□□ 0.56
Lbx1P52955 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lbx1P52955 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lbx1P52955 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lbx1P52955 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.57■□□□□ 0.56
Lbx1P52955 Gm11539-201ENSMUST00000119837 557 ntBASIC18.57■□□□□ 0.56
Lbx1P52955 Gm13436-201ENSMUST00000120418 567 ntBASIC18.57■□□□□ 0.56
Lbx1P52955 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Lbx1P52955 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lbx1P52955 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.57■□□□□ 0.56
Lbx1P52955 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lbx1P52955 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lbx1P52955 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lbx1P52955 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lbx1P52955 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lbx1P52955 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lbx1P52955 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lbx1P52955 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.56■□□□□ 0.56
Lbx1P52955 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lbx1P52955 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.56■□□□□ 0.56
Lbx1P52955 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lbx1P52955 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lbx1P52955 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lbx1P52955 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lbx1P52955 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lbx1P52955 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lbx1P52955 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lbx1P52955 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lbx1P52955 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lbx1P52955 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lbx1P52955 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lbx1P52955 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lbx1P52955 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lbx1P52955 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.54■□□□□ 0.56
Lbx1P52955 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lbx1P52955 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.54■□□□□ 0.56
Lbx1P52955 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lbx1P52955 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lbx1P52955 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lbx1P52955 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lbx1P52955 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lbx1P52955 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lbx1P52955 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lbx1P52955 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lbx1P52955 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Lbx1P52955 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lbx1P52955 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lbx1P52955 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lbx1P52955 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.53■□□□□ 0.56
Lbx1P52955 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.53■□□□□ 0.56
Lbx1P52955 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lbx1P52955 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lbx1P52955 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lbx1P52955 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lbx1P52955 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lbx1P52955 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.53■□□□□ 0.56
Lbx1P52955 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lbx1P52955 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lbx1P52955 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lbx1P52955 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lbx1P52955 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lbx1P52955 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lbx1P52955 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.52■□□□□ 0.56
Lbx1P52955 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lbx1P52955 Gm43514-201ENSMUST00000198852 424 ntBASIC18.52■□□□□ 0.56
Lbx1P52955 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lbx1P52955 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lbx1P52955 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lbx1P52955 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.51■□□□□ 0.55
Lbx1P52955 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.51■□□□□ 0.55
Lbx1P52955 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Lbx1P52955 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Lbx1P52955 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lbx1P52955 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
Lbx1P52955 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.51■□□□□ 0.55
Lbx1P52955 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.51■□□□□ 0.55
Lbx1P52955 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.51■□□□□ 0.55
Lbx1P52955 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.51■□□□□ 0.55
Lbx1P52955 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lbx1P52955 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lbx1P52955 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lbx1P52955 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lbx1P52955 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lbx1P52955 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lbx1P52955 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Lbx1P52955 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lbx1P52955 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lbx1P52955 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Lbx1P52955 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lbx1P52955 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lbx1P52955 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lbx1P52955 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Lbx1P52955 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lbx1P52955 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Lbx1P52955 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lbx1P52955 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lbx1P52955 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lbx1P52955 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lbx1P52955 Gm44549-201ENSMUST00000208351 577 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 160.3 ms