Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdx1P52946 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pdx1P52946 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pdx1P52946 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pdx1P52946 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdx1P52946 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.92■□□□□ 0.62
Pdx1P52946 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.92■□□□□ 0.62
Pdx1P52946 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.92■□□□□ 0.62
Pdx1P52946 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdx1P52946 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdx1P52946 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdx1P52946 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pdx1P52946 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pdx1P52946 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdx1P52946 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdx1P52946 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdx1P52946 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pdx1P52946 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdx1P52946 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdx1P52946 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdx1P52946 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdx1P52946 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.91■□□□□ 0.62
Pdx1P52946 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pdx1P52946 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.91■□□□□ 0.62
Pdx1P52946 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdx1P52946 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.91■□□□□ 0.62
Pdx1P52946 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.91■□□□□ 0.62
Pdx1P52946 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Pdx1P52946 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Pdx1P52946 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdx1P52946 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdx1P52946 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdx1P52946 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdx1P52946 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pdx1P52946 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdx1P52946 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pdx1P52946 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdx1P52946 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdx1P52946 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdx1P52946 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.9■□□□□ 0.62
Pdx1P52946 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.9■□□□□ 0.62
Pdx1P52946 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pdx1P52946 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdx1P52946 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdx1P52946 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdx1P52946 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pdx1P52946 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pdx1P52946 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Pdx1P52946 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdx1P52946 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Pdx1P52946 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.89■□□□□ 0.61
Pdx1P52946 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.89■□□□□ 0.61
Pdx1P52946 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Pdx1P52946 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdx1P52946 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdx1P52946 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdx1P52946 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdx1P52946 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdx1P52946 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pdx1P52946 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdx1P52946 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.88■□□□□ 0.61
Pdx1P52946 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Pdx1P52946 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdx1P52946 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdx1P52946 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdx1P52946 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pdx1P52946 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pdx1P52946 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Pdx1P52946 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.88■□□□□ 0.61
Pdx1P52946 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdx1P52946 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdx1P52946 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdx1P52946 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.88■□□□□ 0.61
Pdx1P52946 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdx1P52946 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdx1P52946 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pdx1P52946 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.87■□□□□ 0.61
Pdx1P52946 Gm7860-201ENSMUST00000121190 879 ntBASIC18.87■□□□□ 0.61
Pdx1P52946 Gm38205-201ENSMUST00000192243 258 ntBASIC18.87■□□□□ 0.61
Pdx1P52946 Iqck-206ENSMUST00000208658 2891 ntBASIC18.87■□□□□ 0.61
Pdx1P52946 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdx1P52946 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pdx1P52946 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pdx1P52946 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdx1P52946 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdx1P52946 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdx1P52946 Gm9988-201ENSMUST00000069786 435 ntBASIC18.87■□□□□ 0.61
Pdx1P52946 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdx1P52946 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pdx1P52946 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdx1P52946 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdx1P52946 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pdx1P52946 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.86■□□□□ 0.61
Pdx1P52946 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdx1P52946 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdx1P52946 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.86■□□□□ 0.61
Pdx1P52946 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdx1P52946 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pdx1P52946 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdx1P52946 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms