Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Nek1P51954 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.3■■□□□ 1
Nek1P51954 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nek1P51954 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Nek1P51954 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.3■■□□□ 1
Nek1P51954 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nek1P51954 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nek1P51954 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nek1P51954 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Nek1P51954 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nek1P51954 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Nek1P51954 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nek1P51954 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.29■■□□□ 1
Nek1P51954 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.29■■□□□ 1
Nek1P51954 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.29■■□□□ 1
Nek1P51954 Gm5874-201ENSMUST00000096101 508 ntBASIC21.29■■□□□ 1
Nek1P51954 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nek1P51954 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Nek1P51954 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nek1P51954 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Nek1P51954 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nek1P51954 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Nek1P51954 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nek1P51954 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.28■■□□□ 1
Nek1P51954 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nek1P51954 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nek1P51954 BC021767-201ENSMUST00000126387 1716 ntBASIC21.28■■□□□ 1
Nek1P51954 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nek1P51954 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nek1P51954 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nek1P51954 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Nek1P51954 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nek1P51954 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nek1P51954 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.27■■□□□ 1
Nek1P51954 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nek1P51954 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nek1P51954 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Nek1P51954 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nek1P51954 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nek1P51954 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nek1P51954 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nek1P51954 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.26■□□□□ 0.99
Nek1P51954 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Nek1P51954 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nek1P51954 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nek1P51954 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nek1P51954 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.26■□□□□ 0.99
Nek1P51954 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nek1P51954 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Nek1P51954 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nek1P51954 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nek1P51954 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Nek1P51954 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nek1P51954 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Nek1P51954 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.26■□□□□ 0.99
Nek1P51954 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.25■□□□□ 0.99
Nek1P51954 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Nek1P51954 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Nek1P51954 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nek1P51954 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nek1P51954 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nek1P51954 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nek1P51954 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nek1P51954 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nek1P51954 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nek1P51954 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nek1P51954 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nek1P51954 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nek1P51954 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek1P51954 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Nek1P51954 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek1P51954 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek1P51954 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek1P51954 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek1P51954 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nek1P51954 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek1P51954 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.23■□□□□ 0.99
Nek1P51954 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek1P51954 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek1P51954 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nek1P51954 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek1P51954 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek1P51954 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek1P51954 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nek1P51954 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nek1P51954 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nek1P51954 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nek1P51954 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nek1P51954 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nek1P51954 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nek1P51954 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.22■□□□□ 0.99
Nek1P51954 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek1P51954 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek1P51954 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Nek1P51954 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek1P51954 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek1P51954 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek1P51954 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek1P51954 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek1P51954 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms