Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Lhx3P50481 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.48■□□□□ 0.71
Lhx3P50481 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx3P50481 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Lhx3P50481 Gm27405-201ENSMUST00000184201 112 ntBASIC19.48■□□□□ 0.71
Lhx3P50481 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.48■□□□□ 0.71
Lhx3P50481 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx3P50481 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Lhx3P50481 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx3P50481 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Lhx3P50481 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.47■□□□□ 0.71
Lhx3P50481 Gm7291-201ENSMUST00000199147 382 ntBASIC19.47■□□□□ 0.71
Lhx3P50481 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx3P50481 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Lhx3P50481 Golph3-202ENSMUST00000226517 2359 ntBASIC19.46■□□□□ 0.71
Lhx3P50481 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx3P50481 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lhx3P50481 Gm13534-201ENSMUST00000121169 513 ntBASIC19.46■□□□□ 0.71
Lhx3P50481 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx3P50481 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx3P50481 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx3P50481 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx3P50481 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx3P50481 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lhx3P50481 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.7
Lhx3P50481 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Lhx3P50481 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Lhx3P50481 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx3P50481 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Lhx3P50481 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx3P50481 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx3P50481 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx3P50481 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx3P50481 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx3P50481 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx3P50481 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx3P50481 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx3P50481 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx3P50481 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx3P50481 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Lhx3P50481 Gm7514-201ENSMUST00000209475 934 ntBASIC19.44■□□□□ 0.7
Lhx3P50481 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Lhx3P50481 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.44■□□□□ 0.7
Lhx3P50481 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx3P50481 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx3P50481 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx3P50481 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx3P50481 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx3P50481 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Lhx3P50481 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx3P50481 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx3P50481 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.43■□□□□ 0.7
Lhx3P50481 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.43■□□□□ 0.7
Lhx3P50481 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx3P50481 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx3P50481 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.43■□□□□ 0.7
Lhx3P50481 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx3P50481 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx3P50481 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx3P50481 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx3P50481 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lhx3P50481 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx3P50481 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Lhx3P50481 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Lhx3P50481 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.42■□□□□ 0.7
Lhx3P50481 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lhx3P50481 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx3P50481 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx3P50481 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx3P50481 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
Lhx3P50481 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx3P50481 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx3P50481 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx3P50481 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx3P50481 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.41■□□□□ 0.7
Lhx3P50481 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.41■□□□□ 0.7
Lhx3P50481 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lhx3P50481 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx3P50481 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Lhx3P50481 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.41■□□□□ 0.7
Lhx3P50481 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx3P50481 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx3P50481 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Lhx3P50481 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx3P50481 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx3P50481 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.4■□□□□ 0.7
Lhx3P50481 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx3P50481 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx3P50481 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx3P50481 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.4■□□□□ 0.7
Lhx3P50481 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.4■□□□□ 0.7
Lhx3P50481 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.4■□□□□ 0.7
Lhx3P50481 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.4■□□□□ 0.7
Lhx3P50481 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx3P50481 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx3P50481 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Lhx3P50481 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx3P50481 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.39■□□□□ 0.69
Lhx3P50481 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx3P50481 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms