Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.51■□□□□ 0.71
SftpbP50405 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SftpbP50405 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.51■□□□□ 0.71
SftpbP50405 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.51■□□□□ 0.71
SftpbP50405 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SftpbP50405 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SftpbP50405 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SftpbP50405 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.51■□□□□ 0.71
SftpbP50405 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SftpbP50405 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SftpbP50405 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SftpbP50405 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SftpbP50405 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SftpbP50405 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SftpbP50405 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SftpbP50405 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SftpbP50405 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SftpbP50405 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SftpbP50405 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SftpbP50405 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SftpbP50405 Gm12922-201ENSMUST00000120626 809 ntBASIC19.5■□□□□ 0.71
SftpbP50405 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SftpbP50405 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SftpbP50405 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SftpbP50405 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SftpbP50405 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SftpbP50405 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SftpbP50405 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SftpbP50405 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SftpbP50405 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SftpbP50405 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SftpbP50405 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SftpbP50405 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SftpbP50405 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SftpbP50405 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SftpbP50405 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SftpbP50405 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SftpbP50405 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.49■□□□□ 0.71
SftpbP50405 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SftpbP50405 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SftpbP50405 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SftpbP50405 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SftpbP50405 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SftpbP50405 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SftpbP50405 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SftpbP50405 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SftpbP50405 Serp2-204ENSMUST00000228055 705 ntBASIC19.48■□□□□ 0.71
SftpbP50405 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SftpbP50405 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SftpbP50405 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SftpbP50405 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
SftpbP50405 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SftpbP50405 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SftpbP50405 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SftpbP50405 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SftpbP50405 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SftpbP50405 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SftpbP50405 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.47■□□□□ 0.71
SftpbP50405 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SftpbP50405 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SftpbP50405 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
SftpbP50405 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SftpbP50405 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SftpbP50405 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SftpbP50405 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SftpbP50405 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.47■□□□□ 0.71
SftpbP50405 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SftpbP50405 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpbP50405 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpbP50405 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.46■□□□□ 0.71
SftpbP50405 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpbP50405 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpbP50405 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
SftpbP50405 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpbP50405 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.46■□□□□ 0.71
SftpbP50405 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpbP50405 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpbP50405 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpbP50405 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SftpbP50405 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SftpbP50405 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SftpbP50405 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SftpbP50405 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SftpbP50405 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SftpbP50405 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SftpbP50405 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SftpbP50405 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.45■□□□□ 0.7
SftpbP50405 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SftpbP50405 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.45■□□□□ 0.7
SftpbP50405 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SftpbP50405 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SftpbP50405 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SftpbP50405 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SftpbP50405 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SftpbP50405 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SftpbP50405 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SftpbP50405 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SftpbP50405 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.44■□□□□ 0.7
SftpbP50405 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SftpbP50405 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms