Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Brca1P48754 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Brca1P48754 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Brca1P48754 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Brca1P48754 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
Brca1P48754 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Brca1P48754 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Brca1P48754 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Brca1P48754 Gm2559-201ENSMUST00000201323 363 ntBASIC21.83■■□□□ 1.08
Brca1P48754 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Brca1P48754 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Brca1P48754 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Brca1P48754 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Brca1P48754 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Brca1P48754 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Brca1P48754 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Brca1P48754 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Brca1P48754 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Brca1P48754 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Brca1P48754 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Brca1P48754 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.81■■□□□ 1.08
Brca1P48754 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Brca1P48754 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Brca1P48754 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Brca1P48754 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Brca1P48754 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brca1P48754 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Brca1P48754 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brca1P48754 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Brca1P48754 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brca1P48754 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brca1P48754 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Brca1P48754 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.8■■□□□ 1.08
Brca1P48754 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brca1P48754 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brca1P48754 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brca1P48754 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brca1P48754 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.79■■□□□ 1.08
Brca1P48754 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Brca1P48754 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.79■■□□□ 1.08
Brca1P48754 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Brca1P48754 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Brca1P48754 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.79■■□□□ 1.08
Brca1P48754 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Brca1P48754 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.79■■□□□ 1.08
Brca1P48754 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.79■■□□□ 1.08
Brca1P48754 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Brca1P48754 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Brca1P48754 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Brca1P48754 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Brca1P48754 Mir1199-201ENSMUST00000117015 119 ntBASIC21.78■■□□□ 1.08
Brca1P48754 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Brca1P48754 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.78■■□□□ 1.08
Brca1P48754 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
Brca1P48754 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Brca1P48754 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Brca1P48754 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Brca1P48754 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Brca1P48754 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.78■■□□□ 1.08
Brca1P48754 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Brca1P48754 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Brca1P48754 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Brca1P48754 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Brca1P48754 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Brca1P48754 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Brca1P48754 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Brca1P48754 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.77■■□□□ 1.08
Brca1P48754 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.77■■□□□ 1.08
Brca1P48754 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.77■■□□□ 1.08
Brca1P48754 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Brca1P48754 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Brca1P48754 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Brca1P48754 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.77■■□□□ 1.07
Brca1P48754 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.77■■□□□ 1.07
Brca1P48754 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Brca1P48754 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Brca1P48754 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.76■■□□□ 1.07
Brca1P48754 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Brca1P48754 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.76■■□□□ 1.07
Brca1P48754 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Brca1P48754 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Brca1P48754 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Brca1P48754 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.76■■□□□ 1.07
Brca1P48754 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Brca1P48754 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Brca1P48754 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Brca1P48754 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Brca1P48754 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Brca1P48754 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Brca1P48754 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Brca1P48754 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Brca1P48754 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Brca1P48754 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.75■■□□□ 1.07
Brca1P48754 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Brca1P48754 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Brca1P48754 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Brca1P48754 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Brca1P48754 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Brca1P48754 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.74■■□□□ 1.07
Brca1P48754 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms