Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.03■□□□□ 0.8
Rfx2P48379 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx2P48379 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rfx2P48379 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx2P48379 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx2P48379 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rfx2P48379 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx2P48379 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx2P48379 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx2P48379 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Rfx2P48379 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx2P48379 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx2P48379 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx2P48379 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Rfx2P48379 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx2P48379 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rfx2P48379 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx2P48379 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.02■□□□□ 0.8
Rfx2P48379 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx2P48379 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx2P48379 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rfx2P48379 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rfx2P48379 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rfx2P48379 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Rfx2P48379 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx2P48379 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx2P48379 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx2P48379 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.01■□□□□ 0.79
Rfx2P48379 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx2P48379 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx2P48379 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx2P48379 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx2P48379 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.01■□□□□ 0.79
Rfx2P48379 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx2P48379 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx2P48379 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Rfx2P48379 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx2P48379 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20■□□□□ 0.79
Rfx2P48379 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20■□□□□ 0.79
Rfx2P48379 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx2P48379 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rfx2P48379 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx2P48379 Reep4-203ENSMUST00000226563 1444 ntBASIC20■□□□□ 0.79
Rfx2P48379 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx2P48379 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx2P48379 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx2P48379 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rfx2P48379 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx2P48379 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx2P48379 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx2P48379 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx2P48379 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.99■□□□□ 0.79
Rfx2P48379 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rfx2P48379 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx2P48379 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.99■□□□□ 0.79
Rfx2P48379 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx2P48379 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx2P48379 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx2P48379 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.98■□□□□ 0.79
Rfx2P48379 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx2P48379 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.98■□□□□ 0.79
Rfx2P48379 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx2P48379 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx2P48379 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx2P48379 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx2P48379 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx2P48379 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx2P48379 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx2P48379 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx2P48379 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx2P48379 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx2P48379 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.97■□□□□ 0.79
Rfx2P48379 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx2P48379 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx2P48379 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx2P48379 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx2P48379 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx2P48379 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx2P48379 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Rfx2P48379 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx2P48379 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
Rfx2P48379 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx2P48379 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx2P48379 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx2P48379 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.96■□□□□ 0.79
Rfx2P48379 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx2P48379 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx2P48379 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx2P48379 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Rfx2P48379 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx2P48379 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx2P48379 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rfx2P48379 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx2P48379 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Rfx2P48379 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.94■□□□□ 0.78
Rfx2P48379 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.94■□□□□ 0.78
Rfx2P48379 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.94■□□□□ 0.78
Rfx2P48379 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.94■□□□□ 0.78
Rfx2P48379 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Rfx2P48379 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms