Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist1h1aP43275 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist1h1aP43275 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.73■□□□□ 0.11
Hist1h1aP43275 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hist1h1aP43275 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hist1h1aP43275 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Hist1h1aP43275 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist1h1aP43275 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.72■□□□□ 0.11
Hist1h1aP43275 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.72■□□□□ 0.11
Hist1h1aP43275 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hist1h1aP43275 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Hist1h1aP43275 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hist1h1aP43275 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hist1h1aP43275 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hist1h1aP43275 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.71■□□□□ 0.11
Hist1h1aP43275 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Hist1h1aP43275 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hist1h1aP43275 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hist1h1aP43275 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hist1h1aP43275 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hist1h1aP43275 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.71■□□□□ 0.11
Hist1h1aP43275 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hist1h1aP43275 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hist1h1aP43275 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hist1h1aP43275 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hist1h1aP43275 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.71■□□□□ 0.1
Hist1h1aP43275 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.7■□□□□ 0.1
Hist1h1aP43275 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.7■□□□□ 0.1
Hist1h1aP43275 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hist1h1aP43275 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h1aP43275 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.69■□□□□ 0.1
Hist1h1aP43275 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h1aP43275 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.68■□□□□ 0.1
Hist1h1aP43275 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hist1h1aP43275 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h1aP43275 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h1aP43275 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h1aP43275 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h1aP43275 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h1aP43275 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.68■□□□□ 0.1
Hist1h1aP43275 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.68■□□□□ 0.1
Hist1h1aP43275 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.68■□□□□ 0.1
Hist1h1aP43275 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hist1h1aP43275 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h1aP43275 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.68■□□□□ 0.1
Hist1h1aP43275 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h1aP43275 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Hist1h1aP43275 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h1aP43275 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Hist1h1aP43275 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h1aP43275 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms