Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcl12P40224 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.87■□□□□ 0.77
Cxcl12P40224 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cxcl12P40224 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcl12P40224 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcl12P40224 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.87■□□□□ 0.77
Cxcl12P40224 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cxcl12P40224 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.87■□□□□ 0.77
Cxcl12P40224 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.87■□□□□ 0.77
Cxcl12P40224 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.87■□□□□ 0.77
Cxcl12P40224 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.87■□□□□ 0.77
Cxcl12P40224 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcl12P40224 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcl12P40224 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcl12P40224 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcl12P40224 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcl12P40224 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Cxcl12P40224 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.86■□□□□ 0.77
Cxcl12P40224 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.86■□□□□ 0.77
Cxcl12P40224 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cxcl12P40224 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cxcl12P40224 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.86■□□□□ 0.77
Cxcl12P40224 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cxcl12P40224 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cxcl12P40224 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cxcl12P40224 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cxcl12P40224 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.86■□□□□ 0.77
Cxcl12P40224 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cxcl12P40224 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cxcl12P40224 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cxcl12P40224 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Cxcl12P40224 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cxcl12P40224 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cxcl12P40224 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cxcl12P40224 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcl12P40224 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.84■□□□□ 0.77
Cxcl12P40224 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcl12P40224 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcl12P40224 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcl12P40224 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcl12P40224 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcl12P40224 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cxcl12P40224 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.84■□□□□ 0.77
Cxcl12P40224 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cxcl12P40224 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cxcl12P40224 Gm2399-201ENSMUST00000104944 225 ntBASIC19.83■□□□□ 0.77
Cxcl12P40224 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cxcl12P40224 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cxcl12P40224 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cxcl12P40224 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Cxcl12P40224 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cxcl12P40224 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cxcl12P40224 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cxcl12P40224 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cxcl12P40224 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cxcl12P40224 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.82■□□□□ 0.76
Cxcl12P40224 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.82■□□□□ 0.76
Cxcl12P40224 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.82■□□□□ 0.76
Cxcl12P40224 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cxcl12P40224 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.82■□□□□ 0.76
Cxcl12P40224 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Cxcl12P40224 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cxcl12P40224 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cxcl12P40224 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cxcl12P40224 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.81■□□□□ 0.76
Cxcl12P40224 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.81■□□□□ 0.76
Cxcl12P40224 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cxcl12P40224 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cxcl12P40224 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cxcl12P40224 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.81■□□□□ 0.76
Cxcl12P40224 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cxcl12P40224 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cxcl12P40224 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cxcl12P40224 Gm13158-201ENSMUST00000122007 736 ntBASIC19.8■□□□□ 0.76
Cxcl12P40224 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cxcl12P40224 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cxcl12P40224 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cxcl12P40224 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cxcl12P40224 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl12P40224 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cxcl12P40224 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl12P40224 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl12P40224 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl12P40224 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl12P40224 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.79■□□□□ 0.76
Cxcl12P40224 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl12P40224 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl12P40224 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl12P40224 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl12P40224 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.79■□□□□ 0.76
Cxcl12P40224 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl12P40224 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl12P40224 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl12P40224 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cxcl12P40224 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cxcl12P40224 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cxcl12P40224 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cxcl12P40224 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.78■□□□□ 0.76
Cxcl12P40224 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cxcl12P40224 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms