Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh4P39038 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh4P39038 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh4P39038 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh4P39038 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh4P39038 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh4P39038 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdh4P39038 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh4P39038 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Cdh4P39038 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cdh4P39038 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh4P39038 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh4P39038 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Cdh4P39038 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh4P39038 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh4P39038 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh4P39038 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.25■□□□□ 0.51
Cdh4P39038 Gm42778-201ENSMUST00000199644 553 ntBASIC18.25■□□□□ 0.51
Cdh4P39038 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.25■□□□□ 0.51
Cdh4P39038 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.25■□□□□ 0.51
Cdh4P39038 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh4P39038 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Cdh4P39038 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cdh4P39038 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh4P39038 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh4P39038 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh4P39038 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh4P39038 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh4P39038 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh4P39038 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh4P39038 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh4P39038 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh4P39038 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh4P39038 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.24■□□□□ 0.51
Cdh4P39038 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh4P39038 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh4P39038 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh4P39038 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cdh4P39038 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh4P39038 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.24■□□□□ 0.51
Cdh4P39038 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh4P39038 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh4P39038 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh4P39038 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh4P39038 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh4P39038 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.23■□□□□ 0.51
Cdh4P39038 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cdh4P39038 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh4P39038 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh4P39038 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh4P39038 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.23■□□□□ 0.51
Cdh4P39038 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh4P39038 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh4P39038 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.23■□□□□ 0.51
Cdh4P39038 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh4P39038 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh4P39038 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh4P39038 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh4P39038 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh4P39038 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh4P39038 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh4P39038 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cdh4P39038 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.22■□□□□ 0.51
Cdh4P39038 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh4P39038 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.22■□□□□ 0.51
Cdh4P39038 Gm42642-201ENSMUST00000200683 355 ntBASIC18.22■□□□□ 0.51
Cdh4P39038 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh4P39038 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.22■□□□□ 0.51
Cdh4P39038 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cdh4P39038 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Cdh4P39038 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh4P39038 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cdh4P39038 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.22■□□□□ 0.51
Cdh4P39038 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh4P39038 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh4P39038 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdh4P39038 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cdh4P39038 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cdh4P39038 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdh4P39038 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh4P39038 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh4P39038 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cdh4P39038 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh4P39038 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh4P39038 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh4P39038 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh4P39038 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh4P39038 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh4P39038 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdh4P39038 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh4P39038 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cdh4P39038 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cdh4P39038 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh4P39038 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh4P39038 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cdh4P39038 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.2■□□□□ 0.5
Cdh4P39038 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.2■□□□□ 0.5
Cdh4P39038 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh4P39038 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cdh4P39038 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms