Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thbs1P35441 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thbs1P35441 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thbs1P35441 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Thbs1P35441 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thbs1P35441 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Thbs1P35441 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Thbs1P35441 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thbs1P35441 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Thbs1P35441 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thbs1P35441 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Thbs1P35441 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Thbs1P35441 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thbs1P35441 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Thbs1P35441 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thbs1P35441 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thbs1P35441 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thbs1P35441 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thbs1P35441 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thbs1P35441 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Thbs1P35441 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thbs1P35441 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Thbs1P35441 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thbs1P35441 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thbs1P35441 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thbs1P35441 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Thbs1P35441 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Thbs1P35441 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thbs1P35441 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thbs1P35441 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Thbs1P35441 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Thbs1P35441 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thbs1P35441 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Thbs1P35441 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thbs1P35441 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.62■□□□□ 0.41
Thbs1P35441 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thbs1P35441 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thbs1P35441 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Thbs1P35441 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Thbs1P35441 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Thbs1P35441 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thbs1P35441 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Thbs1P35441 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thbs1P35441 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Thbs1P35441 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thbs1P35441 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Thbs1P35441 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thbs1P35441 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Thbs1P35441 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Thbs1P35441 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Thbs1P35441 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thbs1P35441 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thbs1P35441 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thbs1P35441 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Thbs1P35441 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Thbs1P35441 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thbs1P35441 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thbs1P35441 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.61■□□□□ 0.41
Thbs1P35441 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Thbs1P35441 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 Gm27801-201ENSMUST00000184174 223 ntBASIC17.6■□□□□ 0.41
Thbs1P35441 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Thbs1P35441 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Thbs1P35441 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thbs1P35441 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.6■□□□□ 0.41
Thbs1P35441 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Thbs1P35441 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Thbs1P35441 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thbs1P35441 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thbs1P35441 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thbs1P35441 BC021767-201ENSMUST00000126387 1716 ntBASIC17.59■□□□□ 0.41
Thbs1P35441 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thbs1P35441 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thbs1P35441 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.59■□□□□ 0.41
Thbs1P35441 Gm6139-201ENSMUST00000079261 882 ntBASIC17.59■□□□□ 0.41
Thbs1P35441 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thbs1P35441 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Thbs1P35441 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thbs1P35441 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thbs1P35441 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Thbs1P35441 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.58■□□□□ 0.41
Thbs1P35441 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Thbs1P35441 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Thbs1P35441 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thbs1P35441 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thbs1P35441 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thbs1P35441 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms