Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a11P31650 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Slc6a11P31650 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a11P31650 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a11P31650 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a11P31650 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a11P31650 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a11P31650 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a11P31650 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a11P31650 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a11P31650 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Slc6a11P31650 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Slc6a11P31650 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a11P31650 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a11P31650 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a11P31650 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.1■□□□□ 0.49
Slc6a11P31650 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.1■□□□□ 0.49
Slc6a11P31650 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.1■□□□□ 0.49
Slc6a11P31650 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a11P31650 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a11P31650 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a11P31650 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Slc6a11P31650 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a11P31650 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a11P31650 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a11P31650 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.09■□□□□ 0.49
Slc6a11P31650 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a11P31650 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a11P31650 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.09■□□□□ 0.49
Slc6a11P31650 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a11P31650 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.09■□□□□ 0.49
Slc6a11P31650 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Slc6a11P31650 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a11P31650 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Slc6a11P31650 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.09■□□□□ 0.49
Slc6a11P31650 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Slc6a11P31650 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a11P31650 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Slc6a11P31650 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc6a11P31650 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc6a11P31650 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Slc6a11P31650 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Slc6a11P31650 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc6a11P31650 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.48
Slc6a11P31650 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a11P31650 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a11P31650 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a11P31650 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a11P31650 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a11P31650 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Slc6a11P31650 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.07■□□□□ 0.48
Slc6a11P31650 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a11P31650 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a11P31650 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc6a11P31650 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a11P31650 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a11P31650 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a11P31650 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a11P31650 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc6a11P31650 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a11P31650 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc6a11P31650 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a11P31650 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.06■□□□□ 0.48
Slc6a11P31650 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.06■□□□□ 0.48
Slc6a11P31650 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a11P31650 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.05■□□□□ 0.48
Slc6a11P31650 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a11P31650 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Slc6a11P31650 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a11P31650 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a11P31650 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a11P31650 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a11P31650 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.05■□□□□ 0.48
Slc6a11P31650 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Slc6a11P31650 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a11P31650 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.05■□□□□ 0.48
Slc6a11P31650 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a11P31650 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a11P31650 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a11P31650 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a11P31650 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a11P31650 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a11P31650 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a11P31650 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a11P31650 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.04■□□□□ 0.48
Slc6a11P31650 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms