Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a13P31649 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a13P31649 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a13P31649 Gm7860-201ENSMUST00000121190 879 ntBASIC19.45■□□□□ 0.7
Slc6a13P31649 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.45■□□□□ 0.7
Slc6a13P31649 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc6a13P31649 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a13P31649 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a13P31649 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a13P31649 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a13P31649 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.44■□□□□ 0.7
Slc6a13P31649 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a13P31649 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a13P31649 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.44■□□□□ 0.7
Slc6a13P31649 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a13P31649 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a13P31649 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Slc6a13P31649 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Slc6a13P31649 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Slc6a13P31649 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a13P31649 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a13P31649 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Slc6a13P31649 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a13P31649 Gm38205-201ENSMUST00000192243 258 ntBASIC19.43■□□□□ 0.7
Slc6a13P31649 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.43■□□□□ 0.7
Slc6a13P31649 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a13P31649 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Slc6a13P31649 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a13P31649 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a13P31649 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Slc6a13P31649 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.42■□□□□ 0.7
Slc6a13P31649 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.42■□□□□ 0.7
Slc6a13P31649 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a13P31649 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Slc6a13P31649 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a13P31649 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a13P31649 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.42■□□□□ 0.7
Slc6a13P31649 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a13P31649 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.42■□□□□ 0.7
Slc6a13P31649 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a13P31649 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a13P31649 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a13P31649 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a13P31649 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a13P31649 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a13P31649 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a13P31649 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a13P31649 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a13P31649 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a13P31649 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a13P31649 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a13P31649 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a13P31649 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.41■□□□□ 0.7
Slc6a13P31649 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a13P31649 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slc6a13P31649 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Slc6a13P31649 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a13P31649 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.4■□□□□ 0.7
Slc6a13P31649 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a13P31649 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a13P31649 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a13P31649 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Slc6a13P31649 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.4■□□□□ 0.7
Slc6a13P31649 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.4■□□□□ 0.7
Slc6a13P31649 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a13P31649 Gm9988-201ENSMUST00000069786 435 ntBASIC19.4■□□□□ 0.7
Slc6a13P31649 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a13P31649 Reep4-203ENSMUST00000226563 1444 ntBASIC19.4■□□□□ 0.7
Slc6a13P31649 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a13P31649 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a13P31649 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a13P31649 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a13P31649 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a13P31649 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Slc6a13P31649 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Slc6a13P31649 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Slc6a13P31649 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Slc6a13P31649 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a13P31649 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a13P31649 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a13P31649 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.39■□□□□ 0.69
Slc6a13P31649 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Slc6a13P31649 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.39■□□□□ 0.69
Slc6a13P31649 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a13P31649 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a13P31649 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a13P31649 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a13P31649 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a13P31649 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Slc6a13P31649 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a13P31649 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a13P31649 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Slc6a13P31649 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.38■□□□□ 0.69
Slc6a13P31649 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a13P31649 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a13P31649 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.38■□□□□ 0.69
Slc6a13P31649 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a13P31649 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a13P31649 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a13P31649 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms