Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.02■□□□□ 0.64
Nckap1P28660 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nckap1P28660 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Nckap1P28660 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Nckap1P28660 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Nckap1P28660 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nckap1P28660 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.02■□□□□ 0.64
Nckap1P28660 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nckap1P28660 Gm13534-201ENSMUST00000121169 513 ntBASIC19.02■□□□□ 0.64
Nckap1P28660 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Nckap1P28660 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.02■□□□□ 0.64
Nckap1P28660 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Nckap1P28660 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nckap1P28660 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nckap1P28660 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nckap1P28660 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Nckap1P28660 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Nckap1P28660 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nckap1P28660 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nckap1P28660 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nckap1P28660 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nckap1P28660 Gm7860-201ENSMUST00000121190 879 ntBASIC19.01■□□□□ 0.63
Nckap1P28660 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nckap1P28660 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.01■□□□□ 0.63
Nckap1P28660 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nckap1P28660 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nckap1P28660 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nckap1P28660 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nckap1P28660 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nckap1P28660 Nespas-201ENSMUST00000143738 1083 ntBASIC19■□□□□ 0.63
Nckap1P28660 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nckap1P28660 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nckap1P28660 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19■□□□□ 0.63
Nckap1P28660 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Nckap1P28660 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nckap1P28660 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nckap1P28660 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nckap1P28660 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nckap1P28660 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nckap1P28660 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nckap1P28660 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nckap1P28660 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nckap1P28660 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.99■□□□□ 0.63
Nckap1P28660 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Nckap1P28660 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nckap1P28660 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nckap1P28660 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.98■□□□□ 0.63
Nckap1P28660 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nckap1P28660 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nckap1P28660 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nckap1P28660 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Nckap1P28660 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nckap1P28660 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Nckap1P28660 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nckap1P28660 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nckap1P28660 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nckap1P28660 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.97■□□□□ 0.63
Nckap1P28660 Gm5408-201ENSMUST00000197998 747 ntBASIC18.97■□□□□ 0.63
Nckap1P28660 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.97■□□□□ 0.63
Nckap1P28660 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nckap1P28660 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nckap1P28660 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nckap1P28660 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nckap1P28660 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nckap1P28660 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nckap1P28660 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nckap1P28660 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nckap1P28660 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nckap1P28660 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Nckap1P28660 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Nckap1P28660 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Nckap1P28660 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nckap1P28660 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nckap1P28660 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nckap1P28660 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.62
Nckap1P28660 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.62
Nckap1P28660 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nckap1P28660 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nckap1P28660 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Nckap1P28660 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nckap1P28660 Gm4968-201ENSMUST00000071458 858 ntBASIC18.95■□□□□ 0.62
Nckap1P28660 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nckap1P28660 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nckap1P28660 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nckap1P28660 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nckap1P28660 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nckap1P28660 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nckap1P28660 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Nckap1P28660 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
Nckap1P28660 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nckap1P28660 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nckap1P28660 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nckap1P28660 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nckap1P28660 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Nckap1P28660 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Nckap1P28660 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nckap1P28660 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nckap1P28660 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nckap1P28660 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nckap1P28660 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms