Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BgnP28653 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BgnP28653 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BgnP28653 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BgnP28653 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BgnP28653 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.74■□□□□ 0.43
BgnP28653 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BgnP28653 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BgnP28653 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BgnP28653 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BgnP28653 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BgnP28653 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BgnP28653 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BgnP28653 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BgnP28653 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.73■□□□□ 0.43
BgnP28653 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.73■□□□□ 0.43
BgnP28653 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BgnP28653 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BgnP28653 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
BgnP28653 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BgnP28653 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BgnP28653 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BgnP28653 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BgnP28653 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BgnP28653 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BgnP28653 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BgnP28653 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
BgnP28653 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BgnP28653 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BgnP28653 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BgnP28653 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BgnP28653 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BgnP28653 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BgnP28653 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
BgnP28653 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BgnP28653 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BgnP28653 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BgnP28653 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BgnP28653 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BgnP28653 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
BgnP28653 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.71■□□□□ 0.43
BgnP28653 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BgnP28653 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
BgnP28653 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BgnP28653 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BgnP28653 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
BgnP28653 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BgnP28653 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
BgnP28653 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
BgnP28653 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
BgnP28653 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BgnP28653 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.7■□□□□ 0.42
BgnP28653 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BgnP28653 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.7■□□□□ 0.42
BgnP28653 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BgnP28653 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.7■□□□□ 0.42
BgnP28653 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BgnP28653 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
BgnP28653 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.69■□□□□ 0.42
BgnP28653 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.69■□□□□ 0.42
BgnP28653 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
BgnP28653 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.69■□□□□ 0.42
BgnP28653 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
BgnP28653 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.69■□□□□ 0.42
BgnP28653 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.69■□□□□ 0.42
BgnP28653 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BgnP28653 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.69■□□□□ 0.42
BgnP28653 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.68■□□□□ 0.42
BgnP28653 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BgnP28653 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BgnP28653 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BgnP28653 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BgnP28653 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
BgnP28653 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BgnP28653 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BgnP28653 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BgnP28653 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BgnP28653 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BgnP28653 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BgnP28653 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.68■□□□□ 0.42
BgnP28653 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BgnP28653 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BgnP28653 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BgnP28653 AA386476-201ENSMUST00000098781 1665 ntBASIC17.67■□□□□ 0.42
BgnP28653 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BgnP28653 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms