Protein–RNA interactions for Protein: P28236

Gja8, Gap junction alpha-8 protein, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja8P28236 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Gja8P28236 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Gja8P28236 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gja8P28236 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gja8P28236 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gja8P28236 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Gja8P28236 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Gja8P28236 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.33■■□□□ 1.01
Gja8P28236 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Gja8P28236 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Gja8P28236 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Gja8P28236 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.33■■□□□ 1
Gja8P28236 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Gja8P28236 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.33■■□□□ 1
Gja8P28236 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.33■■□□□ 1
Gja8P28236 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gja8P28236 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.32■■□□□ 1
Gja8P28236 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Gja8P28236 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gja8P28236 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Gja8P28236 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
Gja8P28236 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Gja8P28236 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gja8P28236 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gja8P28236 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gja8P28236 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.31■■□□□ 1
Gja8P28236 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gja8P28236 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.31■■□□□ 1
Gja8P28236 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.31■■□□□ 1
Gja8P28236 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gja8P28236 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Gja8P28236 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Gja8P28236 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gja8P28236 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gja8P28236 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.3■■□□□ 1
Gja8P28236 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gja8P28236 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gja8P28236 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.3■■□□□ 1
Gja8P28236 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Gja8P28236 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gja8P28236 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Gja8P28236 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gja8P28236 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gja8P28236 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gja8P28236 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gja8P28236 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gja8P28236 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Gja8P28236 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gja8P28236 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gja8P28236 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gja8P28236 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gja8P28236 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gja8P28236 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gja8P28236 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.29■■□□□ 1
Gja8P28236 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.29■■□□□ 1
Gja8P28236 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gja8P28236 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gja8P28236 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Gja8P28236 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gja8P28236 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Gja8P28236 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.28■■□□□ 1
Gja8P28236 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.27■■□□□ 1
Gja8P28236 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
Gja8P28236 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.27■■□□□ 1
Gja8P28236 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gja8P28236 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Gja8P28236 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Gja8P28236 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gja8P28236 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gja8P28236 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gja8P28236 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gja8P28236 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gja8P28236 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gja8P28236 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Gja8P28236 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gja8P28236 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gja8P28236 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gja8P28236 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gja8P28236 Notumos-201ENSMUST00000151998 2659 ntBASIC21.26■□□□□ 0.99
Gja8P28236 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gja8P28236 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gja8P28236 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gja8P28236 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gja8P28236 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.25■□□□□ 0.99
Gja8P28236 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Gja8P28236 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.25■□□□□ 0.99
Gja8P28236 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Gja8P28236 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gja8P28236 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Gja8P28236 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Gja8P28236 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
Gja8P28236 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Gja8P28236 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Gja8P28236 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gja8P28236 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gja8P28236 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gja8P28236 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gja8P28236 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gja8P28236 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Gja8P28236 Gm37055-201ENSMUST00000191866 133 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms