Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf8P23611 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf8P23611 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf8P23611 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf8P23611 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf8P23611 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Irf8P23611 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf8P23611 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf8P23611 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf8P23611 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf8P23611 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Irf8P23611 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Irf8P23611 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.69■□□□□ 0.9
Irf8P23611 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.69■□□□□ 0.9
Irf8P23611 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Irf8P23611 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.69■□□□□ 0.9
Irf8P23611 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Irf8P23611 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf8P23611 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.68■□□□□ 0.9
Irf8P23611 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Irf8P23611 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Irf8P23611 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.68■□□□□ 0.9
Irf8P23611 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.68■□□□□ 0.9
Irf8P23611 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.68■□□□□ 0.9
Irf8P23611 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf8P23611 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf8P23611 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Irf8P23611 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Irf8P23611 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf8P23611 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf8P23611 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Irf8P23611 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Irf8P23611 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Irf8P23611 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf8P23611 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Irf8P23611 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Irf8P23611 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.67■□□□□ 0.9
Irf8P23611 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.67■□□□□ 0.9
Irf8P23611 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf8P23611 Reep4-203ENSMUST00000226563 1444 ntBASIC20.67■□□□□ 0.9
Irf8P23611 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf8P23611 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf8P23611 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf8P23611 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf8P23611 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf8P23611 Gm13146-201ENSMUST00000118508 780 ntBASIC20.66■□□□□ 0.9
Irf8P23611 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf8P23611 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Irf8P23611 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf8P23611 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.66■□□□□ 0.9
Irf8P23611 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf8P23611 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf8P23611 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Irf8P23611 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Irf8P23611 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Irf8P23611 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Irf8P23611 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Irf8P23611 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Irf8P23611 Gm13234-201ENSMUST00000120010 747 ntBASIC20.65■□□□□ 0.9
Irf8P23611 Gm18284-201ENSMUST00000172604 624 ntBASIC20.65■□□□□ 0.9
Irf8P23611 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.65■□□□□ 0.9
Irf8P23611 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Irf8P23611 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.65■□□□□ 0.9
Irf8P23611 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Irf8P23611 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Irf8P23611 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Irf8P23611 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Irf8P23611 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Irf8P23611 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Irf8P23611 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Irf8P23611 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Irf8P23611 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Irf8P23611 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Irf8P23611 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Irf8P23611 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Irf8P23611 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Irf8P23611 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Irf8P23611 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Irf8P23611 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Irf8P23611 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf8P23611 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf8P23611 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Irf8P23611 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.63■□□□□ 0.89
Irf8P23611 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf8P23611 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf8P23611 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Irf8P23611 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.63■□□□□ 0.89
Irf8P23611 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf8P23611 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf8P23611 Gm5874-201ENSMUST00000096101 508 ntBASIC20.63■□□□□ 0.89
Irf8P23611 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf8P23611 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf8P23611 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Irf8P23611 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Irf8P23611 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Irf8P23611 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Irf8P23611 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Irf8P23611 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Irf8P23611 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Irf8P23611 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms