Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cbx3P23198 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cbx3P23198 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cbx3P23198 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cbx3P23198 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cbx3P23198 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.34■□□□□ 0.37
Cbx3P23198 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cbx3P23198 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cbx3P23198 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cbx3P23198 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cbx3P23198 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cbx3P23198 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cbx3P23198 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cbx3P23198 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cbx3P23198 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cbx3P23198 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cbx3P23198 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cbx3P23198 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cbx3P23198 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cbx3P23198 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cbx3P23198 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cbx3P23198 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cbx3P23198 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cbx3P23198 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.33■□□□□ 0.36
Cbx3P23198 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cbx3P23198 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cbx3P23198 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cbx3P23198 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cbx3P23198 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cbx3P23198 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cbx3P23198 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.33■□□□□ 0.36
Cbx3P23198 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cbx3P23198 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cbx3P23198 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.32■□□□□ 0.36
Cbx3P23198 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cbx3P23198 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cbx3P23198 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cbx3P23198 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cbx3P23198 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cbx3P23198 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cbx3P23198 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Cbx3P23198 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cbx3P23198 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cbx3P23198 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cbx3P23198 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cbx3P23198 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cbx3P23198 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cbx3P23198 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cbx3P23198 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cbx3P23198 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Cbx3P23198 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cbx3P23198 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cbx3P23198 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cbx3P23198 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.31■□□□□ 0.36
Cbx3P23198 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cbx3P23198 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cbx3P23198 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cbx3P23198 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cbx3P23198 Gm11175-201ENSMUST00000116172 543 ntBASIC17.31■□□□□ 0.36
Cbx3P23198 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.31■□□□□ 0.36
Cbx3P23198 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cbx3P23198 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cbx3P23198 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.31■□□□□ 0.36
Cbx3P23198 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cbx3P23198 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cbx3P23198 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cbx3P23198 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cbx3P23198 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cbx3P23198 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cbx3P23198 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cbx3P23198 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.3■□□□□ 0.36
Cbx3P23198 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cbx3P23198 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cbx3P23198 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cbx3P23198 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cbx3P23198 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cbx3P23198 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cbx3P23198 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cbx3P23198 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cbx3P23198 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cbx3P23198 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cbx3P23198 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cbx3P23198 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cbx3P23198 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.29■□□□□ 0.36
Cbx3P23198 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cbx3P23198 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.29■□□□□ 0.36
Cbx3P23198 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cbx3P23198 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cbx3P23198 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
Cbx3P23198 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cbx3P23198 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cbx3P23198 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.28■□□□□ 0.36
Cbx3P23198 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cbx3P23198 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cbx3P23198 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cbx3P23198 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cbx3P23198 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cbx3P23198 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.28■□□□□ 0.36
Cbx3P23198 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.28■□□□□ 0.36
Cbx3P23198 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms