Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VimP20152 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.47■□□□□ 0.71
VimP20152 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.47■□□□□ 0.71
VimP20152 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VimP20152 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VimP20152 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VimP20152 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VimP20152 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VimP20152 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VimP20152 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VimP20152 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
VimP20152 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VimP20152 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
VimP20152 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VimP20152 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VimP20152 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.46■□□□□ 0.71
VimP20152 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VimP20152 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VimP20152 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
VimP20152 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VimP20152 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
VimP20152 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VimP20152 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VimP20152 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VimP20152 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VimP20152 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VimP20152 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VimP20152 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VimP20152 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
VimP20152 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VimP20152 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.45■□□□□ 0.7
VimP20152 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VimP20152 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VimP20152 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VimP20152 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VimP20152 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VimP20152 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VimP20152 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
VimP20152 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VimP20152 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.44■□□□□ 0.7
VimP20152 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VimP20152 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VimP20152 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VimP20152 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VimP20152 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VimP20152 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VimP20152 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VimP20152 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VimP20152 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VimP20152 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VimP20152 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VimP20152 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VimP20152 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VimP20152 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VimP20152 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VimP20152 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VimP20152 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VimP20152 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VimP20152 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.43■□□□□ 0.7
VimP20152 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VimP20152 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VimP20152 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.43■□□□□ 0.7
VimP20152 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VimP20152 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VimP20152 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VimP20152 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VimP20152 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VimP20152 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VimP20152 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
VimP20152 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VimP20152 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VimP20152 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VimP20152 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.42■□□□□ 0.7
VimP20152 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VimP20152 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VimP20152 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VimP20152 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VimP20152 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
VimP20152 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.41■□□□□ 0.7
VimP20152 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VimP20152 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
VimP20152 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.41■□□□□ 0.7
VimP20152 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VimP20152 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VimP20152 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.41■□□□□ 0.7
VimP20152 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.41■□□□□ 0.7
VimP20152 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
VimP20152 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
VimP20152 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
VimP20152 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.41■□□□□ 0.7
VimP20152 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.41■□□□□ 0.7
VimP20152 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
VimP20152 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VimP20152 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VimP20152 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VimP20152 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VimP20152 Gm27502-201ENSMUST00000183495 199 ntBASIC19.4■□□□□ 0.7
VimP20152 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VimP20152 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VimP20152 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms