Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Hmgn1P18608 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn1P18608 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn1P18608 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn1P18608 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn1P18608 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Hmgn1P18608 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn1P18608 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn1P18608 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn1P18608 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn1P18608 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn1P18608 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn1P18608 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.49■□□□□ 0.39
Hmgn1P18608 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn1P18608 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgn1P18608 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Hmgn1P18608 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn1P18608 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn1P18608 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn1P18608 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn1P18608 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hmgn1P18608 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.48■□□□□ 0.39
Hmgn1P18608 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn1P18608 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn1P18608 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn1P18608 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn1P18608 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Hmgn1P18608 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn1P18608 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Hmgn1P18608 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.47■□□□□ 0.39
Hmgn1P18608 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn1P18608 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn1P18608 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.47■□□□□ 0.39
Hmgn1P18608 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn1P18608 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.47■□□□□ 0.39
Hmgn1P18608 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn1P18608 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn1P18608 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn1P18608 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn1P18608 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn1P18608 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn1P18608 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn1P18608 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn1P18608 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn1P18608 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn1P18608 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.46■□□□□ 0.39
Hmgn1P18608 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn1P18608 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn1P18608 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn1P18608 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn1P18608 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn1P18608 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Hmgn1P18608 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Hmgn1P18608 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn1P18608 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.46■□□□□ 0.39
Hmgn1P18608 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hmgn1P18608 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hmgn1P18608 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Hmgn1P18608 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hmgn1P18608 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn1P18608 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.45■□□□□ 0.38
Hmgn1P18608 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn1P18608 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.45■□□□□ 0.38
Hmgn1P18608 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hmgn1P18608 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Hmgn1P18608 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn1P18608 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.45■□□□□ 0.38
Hmgn1P18608 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn1P18608 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Hmgn1P18608 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.44■□□□□ 0.38
Hmgn1P18608 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn1P18608 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hmgn1P18608 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn1P18608 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn1P18608 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn1P18608 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn1P18608 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.44■□□□□ 0.38
Hmgn1P18608 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn1P18608 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn1P18608 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn1P18608 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hmgn1P18608 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn1P18608 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn1P18608 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn1P18608 Gm15820-201ENSMUST00000201566 728 ntBASIC17.43■□□□□ 0.38
Hmgn1P18608 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn1P18608 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn1P18608 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hmgn1P18608 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Hmgn1P18608 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Hmgn1P18608 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn1P18608 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn1P18608 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn1P18608 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn1P18608 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.42■□□□□ 0.38
Hmgn1P18608 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn1P18608 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn1P18608 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn1P18608 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn1P18608 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms