Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.15■□□□□ 0.5
Sod1P08228 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sod1P08228 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sod1P08228 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sod1P08228 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sod1P08228 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Sod1P08228 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Sod1P08228 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sod1P08228 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sod1P08228 Gm27275-201ENSMUST00000184318 272 ntBASIC18.14■□□□□ 0.49
Sod1P08228 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sod1P08228 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sod1P08228 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sod1P08228 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sod1P08228 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Sod1P08228 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sod1P08228 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Sod1P08228 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sod1P08228 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sod1P08228 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
Sod1P08228 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.13■□□□□ 0.49
Sod1P08228 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sod1P08228 Gm10812-201ENSMUST00000099864 546 ntBASIC18.13■□□□□ 0.49
Sod1P08228 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sod1P08228 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.13■□□□□ 0.49
Sod1P08228 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sod1P08228 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Sod1P08228 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sod1P08228 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sod1P08228 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.12■□□□□ 0.49
Sod1P08228 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.12■□□□□ 0.49
Sod1P08228 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sod1P08228 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sod1P08228 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sod1P08228 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sod1P08228 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sod1P08228 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.11■□□□□ 0.49
Sod1P08228 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sod1P08228 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.11■□□□□ 0.49
Sod1P08228 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sod1P08228 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sod1P08228 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sod1P08228 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sod1P08228 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sod1P08228 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.11■□□□□ 0.49
Sod1P08228 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sod1P08228 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Sod1P08228 Gm12896-201ENSMUST00000118430 226 ntBASIC18.1■□□□□ 0.49
Sod1P08228 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Sod1P08228 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sod1P08228 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Sod1P08228 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sod1P08228 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sod1P08228 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Sod1P08228 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sod1P08228 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sod1P08228 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sod1P08228 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sod1P08228 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sod1P08228 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Sod1P08228 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sod1P08228 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sod1P08228 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.09■□□□□ 0.49
Sod1P08228 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.09■□□□□ 0.49
Sod1P08228 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.09■□□□□ 0.49
Sod1P08228 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sod1P08228 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.09■□□□□ 0.49
Sod1P08228 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sod1P08228 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Sod1P08228 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.09■□□□□ 0.49
Sod1P08228 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sod1P08228 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sod1P08228 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
Sod1P08228 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sod1P08228 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sod1P08228 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sod1P08228 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Sod1P08228 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sod1P08228 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sod1P08228 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.07■□□□□ 0.48
Sod1P08228 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sod1P08228 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sod1P08228 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sod1P08228 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sod1P08228 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sod1P08228 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.07■□□□□ 0.48
Sod1P08228 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sod1P08228 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sod1P08228 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sod1P08228 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sod1P08228 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sod1P08228 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sod1P08228 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sod1P08228 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sod1P08228 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sod1P08228 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.06■□□□□ 0.48
Sod1P08228 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sod1P08228 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.06■□□□□ 0.48
Sod1P08228 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sod1P08228 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms