Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc1P07903 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.98■□□□□ 0.15
Ercc1P07903 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.98■□□□□ 0.15
Ercc1P07903 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc1P07903 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc1P07903 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc1P07903 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc1P07903 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc1P07903 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc1P07903 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc1P07903 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc1P07903 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ercc1P07903 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc1P07903 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc1P07903 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc1P07903 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.97■□□□□ 0.15
Ercc1P07903 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Ercc1P07903 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc1P07903 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc1P07903 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc1P07903 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ercc1P07903 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ercc1P07903 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ercc1P07903 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc1P07903 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ercc1P07903 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc1P07903 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc1P07903 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc1P07903 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc1P07903 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc1P07903 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc1P07903 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc1P07903 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc1P07903 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc1P07903 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ercc1P07903 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.95■□□□□ 0.14
Ercc1P07903 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc1P07903 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
Ercc1P07903 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.95■□□□□ 0.14
Ercc1P07903 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.95■□□□□ 0.14
Ercc1P07903 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.95■□□□□ 0.14
Ercc1P07903 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc1P07903 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc1P07903 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ercc1P07903 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc1P07903 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc1P07903 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc1P07903 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ercc1P07903 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Ercc1P07903 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc1P07903 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.95■□□□□ 0.14
Ercc1P07903 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc1P07903 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.94■□□□□ 0.14
Ercc1P07903 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc1P07903 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc1P07903 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc1P07903 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc1P07903 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
Ercc1P07903 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc1P07903 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.94■□□□□ 0.14
Ercc1P07903 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.94■□□□□ 0.14
Ercc1P07903 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.94■□□□□ 0.14
Ercc1P07903 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc1P07903 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc1P07903 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc1P07903 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc1P07903 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc1P07903 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.94■□□□□ 0.14
Ercc1P07903 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc1P07903 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc1P07903 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ercc1P07903 BC021767-201ENSMUST00000126387 1716 ntBASIC15.94■□□□□ 0.14
Ercc1P07903 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ercc1P07903 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.93■□□□□ 0.14
Ercc1P07903 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ercc1P07903 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ercc1P07903 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ercc1P07903 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ercc1P07903 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ercc1P07903 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ercc1P07903 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ercc1P07903 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Ercc1P07903 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ercc1P07903 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ercc1P07903 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ercc1P07903 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ercc1P07903 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ercc1P07903 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ercc1P07903 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Ercc1P07903 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ercc1P07903 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ercc1P07903 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
Ercc1P07903 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ercc1P07903 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ercc1P07903 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.92■□□□□ 0.14
Ercc1P07903 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.92■□□□□ 0.14
Ercc1P07903 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ercc1P07903 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ercc1P07903 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ercc1P07903 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms