Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shoc2O88520 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shoc2O88520 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shoc2O88520 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shoc2O88520 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shoc2O88520 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Shoc2O88520 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shoc2O88520 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shoc2O88520 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shoc2O88520 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shoc2O88520 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Shoc2O88520 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shoc2O88520 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shoc2O88520 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shoc2O88520 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shoc2O88520 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shoc2O88520 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Shoc2O88520 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.75■□□□□ 0.75
Shoc2O88520 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shoc2O88520 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shoc2O88520 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shoc2O88520 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shoc2O88520 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shoc2O88520 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Shoc2O88520 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shoc2O88520 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shoc2O88520 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Shoc2O88520 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Shoc2O88520 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shoc2O88520 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shoc2O88520 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shoc2O88520 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shoc2O88520 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shoc2O88520 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shoc2O88520 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.74■□□□□ 0.75
Shoc2O88520 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shoc2O88520 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shoc2O88520 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shoc2O88520 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.74■□□□□ 0.75
Shoc2O88520 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shoc2O88520 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shoc2O88520 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shoc2O88520 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shoc2O88520 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shoc2O88520 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shoc2O88520 Gm26833-201ENSMUST00000180899 440 ntBASIC19.73■□□□□ 0.75
Shoc2O88520 Gm40848-201ENSMUST00000221998 324 ntBASIC19.73■□□□□ 0.75
Shoc2O88520 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shoc2O88520 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shoc2O88520 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Shoc2O88520 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shoc2O88520 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shoc2O88520 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.72■□□□□ 0.75
Shoc2O88520 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shoc2O88520 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shoc2O88520 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shoc2O88520 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shoc2O88520 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shoc2O88520 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Shoc2O88520 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shoc2O88520 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shoc2O88520 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shoc2O88520 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shoc2O88520 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.71■□□□□ 0.75
Shoc2O88520 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shoc2O88520 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shoc2O88520 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shoc2O88520 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.71■□□□□ 0.75
Shoc2O88520 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shoc2O88520 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shoc2O88520 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.71■□□□□ 0.75
Shoc2O88520 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shoc2O88520 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shoc2O88520 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shoc2O88520 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Shoc2O88520 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.7■□□□□ 0.74
Shoc2O88520 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.7■□□□□ 0.74
Shoc2O88520 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.7■□□□□ 0.74
Shoc2O88520 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.7■□□□□ 0.74
Shoc2O88520 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.7■□□□□ 0.74
Shoc2O88520 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shoc2O88520 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shoc2O88520 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shoc2O88520 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Shoc2O88520 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Shoc2O88520 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shoc2O88520 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.69■□□□□ 0.74
Shoc2O88520 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Shoc2O88520 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Shoc2O88520 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shoc2O88520 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Shoc2O88520 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Shoc2O88520 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Shoc2O88520 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shoc2O88520 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shoc2O88520 Gm15039-201ENSMUST00000118914 875 ntBASIC19.68■□□□□ 0.74
Shoc2O88520 Gm11421-201ENSMUST00000122124 294 ntBASIC19.68■□□□□ 0.74
Shoc2O88520 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Shoc2O88520 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Shoc2O88520 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms