Protein–RNA interactions for Protein: O70479

Tnfaip1, BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip1O70479 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfaip1O70479 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfaip1O70479 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfaip1O70479 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfaip1O70479 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.27■□□□□ 0.84
Tnfaip1O70479 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfaip1O70479 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfaip1O70479 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tnfaip1O70479 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tnfaip1O70479 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Gm2559-201ENSMUST00000201323 363 ntBASIC20.26■□□□□ 0.83
Tnfaip1O70479 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfaip1O70479 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfaip1O70479 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfaip1O70479 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfaip1O70479 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tnfaip1O70479 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfaip1O70479 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Tnfaip1O70479 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfaip1O70479 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfaip1O70479 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.25■□□□□ 0.83
Tnfaip1O70479 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfaip1O70479 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfaip1O70479 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tnfaip1O70479 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.24■□□□□ 0.83
Tnfaip1O70479 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.24■□□□□ 0.83
Tnfaip1O70479 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfaip1O70479 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfaip1O70479 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.24■□□□□ 0.83
Tnfaip1O70479 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfaip1O70479 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfaip1O70479 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfaip1O70479 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfaip1O70479 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfaip1O70479 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Tnfaip1O70479 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Tnfaip1O70479 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfaip1O70479 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.23■□□□□ 0.83
Tnfaip1O70479 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfaip1O70479 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfaip1O70479 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfaip1O70479 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfaip1O70479 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfaip1O70479 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfaip1O70479 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Tnfaip1O70479 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfaip1O70479 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.22■□□□□ 0.83
Tnfaip1O70479 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.22■□□□□ 0.83
Tnfaip1O70479 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.22■□□□□ 0.83
Tnfaip1O70479 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfaip1O70479 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfaip1O70479 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfaip1O70479 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.21■□□□□ 0.83
Tnfaip1O70479 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfaip1O70479 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.21■□□□□ 0.83
Tnfaip1O70479 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfaip1O70479 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfaip1O70479 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.21■□□□□ 0.83
Tnfaip1O70479 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfaip1O70479 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfaip1O70479 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfaip1O70479 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip1O70479 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip1O70479 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip1O70479 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.2■□□□□ 0.82
Tnfaip1O70479 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip1O70479 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip1O70479 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip1O70479 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.2■□□□□ 0.82
Tnfaip1O70479 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip1O70479 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.2■□□□□ 0.82
Tnfaip1O70479 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip1O70479 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip1O70479 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip1O70479 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfaip1O70479 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfaip1O70479 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfaip1O70479 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfaip1O70479 Gm5643-201ENSMUST00000117081 966 ntBASIC20.19■□□□□ 0.82
Tnfaip1O70479 Gm6576-201ENSMUST00000169678 883 ntBASIC20.19■□□□□ 0.82
Tnfaip1O70479 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.19■□□□□ 0.82
Tnfaip1O70479 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfaip1O70479 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Tnfaip1O70479 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Tnfaip1O70479 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfaip1O70479 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfaip1O70479 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms