Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim3O70209 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim3O70209 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pdlim3O70209 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim3O70209 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim3O70209 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim3O70209 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim3O70209 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.32■□□□□ 0.36
Pdlim3O70209 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Pdlim3O70209 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim3O70209 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Pdlim3O70209 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim3O70209 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim3O70209 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim3O70209 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdlim3O70209 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Pdlim3O70209 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim3O70209 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pdlim3O70209 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim3O70209 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim3O70209 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim3O70209 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim3O70209 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim3O70209 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim3O70209 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim3O70209 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pdlim3O70209 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim3O70209 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Pdlim3O70209 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim3O70209 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim3O70209 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdlim3O70209 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.3■□□□□ 0.36
Pdlim3O70209 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.3■□□□□ 0.36
Pdlim3O70209 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim3O70209 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim3O70209 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdlim3O70209 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim3O70209 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim3O70209 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim3O70209 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.29■□□□□ 0.36
Pdlim3O70209 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.29■□□□□ 0.36
Pdlim3O70209 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim3O70209 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim3O70209 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.29■□□□□ 0.36
Pdlim3O70209 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim3O70209 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim3O70209 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim3O70209 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim3O70209 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.28■□□□□ 0.36
Pdlim3O70209 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pdlim3O70209 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.28■□□□□ 0.36
Pdlim3O70209 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim3O70209 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim3O70209 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim3O70209 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim3O70209 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim3O70209 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.28■□□□□ 0.36
Pdlim3O70209 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.28■□□□□ 0.36
Pdlim3O70209 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim3O70209 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim3O70209 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim3O70209 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim3O70209 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.27■□□□□ 0.36
Pdlim3O70209 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim3O70209 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim3O70209 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Pdlim3O70209 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Pdlim3O70209 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.27■□□□□ 0.36
Pdlim3O70209 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim3O70209 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim3O70209 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Pdlim3O70209 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim3O70209 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim3O70209 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim3O70209 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim3O70209 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim3O70209 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim3O70209 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.26■□□□□ 0.35
Pdlim3O70209 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim3O70209 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.26■□□□□ 0.35
Pdlim3O70209 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.26■□□□□ 0.35
Pdlim3O70209 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim3O70209 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim3O70209 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim3O70209 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim3O70209 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Pdlim3O70209 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim3O70209 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim3O70209 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim3O70209 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim3O70209 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pdlim3O70209 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim3O70209 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim3O70209 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim3O70209 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim3O70209 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim3O70209 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Pdlim3O70209 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim3O70209 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim3O70209 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms