Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Pcdh12O55134 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh12O55134 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh12O55134 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh12O55134 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh12O55134 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh12O55134 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdh12O55134 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh12O55134 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh12O55134 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh12O55134 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh12O55134 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdh12O55134 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdh12O55134 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdh12O55134 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh12O55134 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh12O55134 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh12O55134 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.31■□□□□ 0.36
Pcdh12O55134 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh12O55134 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh12O55134 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh12O55134 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh12O55134 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh12O55134 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh12O55134 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdh12O55134 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh12O55134 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh12O55134 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh12O55134 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh12O55134 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh12O55134 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh12O55134 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh12O55134 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh12O55134 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh12O55134 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh12O55134 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh12O55134 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pcdh12O55134 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh12O55134 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh12O55134 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh12O55134 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh12O55134 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh12O55134 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.29■□□□□ 0.36
Pcdh12O55134 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh12O55134 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh12O55134 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh12O55134 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh12O55134 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh12O55134 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pcdh12O55134 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh12O55134 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh12O55134 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh12O55134 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh12O55134 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh12O55134 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh12O55134 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh12O55134 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh12O55134 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh12O55134 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh12O55134 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh12O55134 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh12O55134 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdh12O55134 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdh12O55134 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh12O55134 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh12O55134 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdh12O55134 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh12O55134 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh12O55134 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdh12O55134 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh12O55134 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh12O55134 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdh12O55134 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh12O55134 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh12O55134 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh12O55134 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.27■□□□□ 0.36
Pcdh12O55134 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdh12O55134 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdh12O55134 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh12O55134 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.27■□□□□ 0.35
Pcdh12O55134 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
Pcdh12O55134 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh12O55134 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh12O55134 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh12O55134 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh12O55134 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh12O55134 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh12O55134 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh12O55134 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh12O55134 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh12O55134 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh12O55134 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh12O55134 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh12O55134 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh12O55134 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh12O55134 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh12O55134 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh12O55134 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh12O55134 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.25■□□□□ 0.35
Pcdh12O55134 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms