Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trdmt1O55055 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Trdmt1O55055 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Trdmt1O55055 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trdmt1O55055 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trdmt1O55055 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trdmt1O55055 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trdmt1O55055 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trdmt1O55055 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trdmt1O55055 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.19■□□□□ 0.98
Trdmt1O55055 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trdmt1O55055 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trdmt1O55055 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.19■□□□□ 0.98
Trdmt1O55055 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trdmt1O55055 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trdmt1O55055 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trdmt1O55055 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trdmt1O55055 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trdmt1O55055 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trdmt1O55055 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Trdmt1O55055 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.18■□□□□ 0.98
Trdmt1O55055 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trdmt1O55055 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trdmt1O55055 Gm27275-201ENSMUST00000184318 272 ntBASIC21.18■□□□□ 0.98
Trdmt1O55055 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trdmt1O55055 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trdmt1O55055 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trdmt1O55055 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trdmt1O55055 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.18■□□□□ 0.98
Trdmt1O55055 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trdmt1O55055 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trdmt1O55055 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trdmt1O55055 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.17■□□□□ 0.98
Trdmt1O55055 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Trdmt1O55055 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.17■□□□□ 0.98
Trdmt1O55055 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trdmt1O55055 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trdmt1O55055 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trdmt1O55055 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trdmt1O55055 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trdmt1O55055 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trdmt1O55055 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trdmt1O55055 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trdmt1O55055 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trdmt1O55055 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trdmt1O55055 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trdmt1O55055 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.16■□□□□ 0.98
Trdmt1O55055 Gm12896-201ENSMUST00000118430 226 ntBASIC21.16■□□□□ 0.98
Trdmt1O55055 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trdmt1O55055 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.16■□□□□ 0.98
Trdmt1O55055 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trdmt1O55055 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trdmt1O55055 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Trdmt1O55055 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trdmt1O55055 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Trdmt1O55055 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trdmt1O55055 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trdmt1O55055 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trdmt1O55055 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trdmt1O55055 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trdmt1O55055 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trdmt1O55055 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trdmt1O55055 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.15■□□□□ 0.98
Trdmt1O55055 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trdmt1O55055 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trdmt1O55055 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.15■□□□□ 0.98
Trdmt1O55055 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trdmt1O55055 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trdmt1O55055 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trdmt1O55055 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trdmt1O55055 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Trdmt1O55055 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trdmt1O55055 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.14■□□□□ 0.97
Trdmt1O55055 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trdmt1O55055 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trdmt1O55055 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.14■□□□□ 0.97
Trdmt1O55055 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trdmt1O55055 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trdmt1O55055 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trdmt1O55055 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trdmt1O55055 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Trdmt1O55055 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trdmt1O55055 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trdmt1O55055 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trdmt1O55055 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trdmt1O55055 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trdmt1O55055 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trdmt1O55055 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.13■□□□□ 0.97
Trdmt1O55055 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trdmt1O55055 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Trdmt1O55055 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trdmt1O55055 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Trdmt1O55055 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.13■□□□□ 0.97
Trdmt1O55055 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trdmt1O55055 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trdmt1O55055 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trdmt1O55055 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Trdmt1O55055 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Trdmt1O55055 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trdmt1O55055 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms