Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkaO54804 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkaO54804 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ChkaO54804 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ChkaO54804 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChkaO54804 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChkaO54804 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ChkaO54804 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChkaO54804 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.3■□□□□ 0.68
ChkaO54804 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
ChkaO54804 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChkaO54804 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChkaO54804 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChkaO54804 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.29■□□□□ 0.68
ChkaO54804 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ChkaO54804 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ChkaO54804 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ChkaO54804 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ChkaO54804 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ChkaO54804 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ChkaO54804 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.29■□□□□ 0.68
ChkaO54804 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ChkaO54804 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ChkaO54804 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.29■□□□□ 0.68
ChkaO54804 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ChkaO54804 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.29■□□□□ 0.68
ChkaO54804 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.29■□□□□ 0.68
ChkaO54804 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ChkaO54804 Gm13241-201ENSMUST00000094493 780 ntBASIC19.29■□□□□ 0.68
ChkaO54804 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ChkaO54804 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ChkaO54804 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ChkaO54804 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ChkaO54804 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ChkaO54804 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ChkaO54804 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ChkaO54804 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ChkaO54804 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ChkaO54804 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.28■□□□□ 0.68
ChkaO54804 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ChkaO54804 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ChkaO54804 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ChkaO54804 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ChkaO54804 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ChkaO54804 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ChkaO54804 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ChkaO54804 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ChkaO54804 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ChkaO54804 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.27■□□□□ 0.68
ChkaO54804 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.27■□□□□ 0.68
ChkaO54804 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ChkaO54804 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ChkaO54804 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.27■□□□□ 0.68
ChkaO54804 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ChkaO54804 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ChkaO54804 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ChkaO54804 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
ChkaO54804 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ChkaO54804 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ChkaO54804 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ChkaO54804 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ChkaO54804 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ChkaO54804 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ChkaO54804 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.26■□□□□ 0.67
ChkaO54804 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ChkaO54804 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ChkaO54804 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ChkaO54804 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ChkaO54804 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ChkaO54804 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ChkaO54804 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ChkaO54804 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ChkaO54804 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ChkaO54804 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ChkaO54804 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ChkaO54804 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ChkaO54804 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ChkaO54804 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ChkaO54804 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ChkaO54804 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ChkaO54804 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ChkaO54804 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ChkaO54804 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ChkaO54804 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ChkaO54804 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ChkaO54804 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ChkaO54804 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ChkaO54804 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ChkaO54804 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ChkaO54804 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ChkaO54804 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ChkaO54804 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ChkaO54804 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.24■□□□□ 0.67
ChkaO54804 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ChkaO54804 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ChkaO54804 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ChkaO54804 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ChkaO54804 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ChkaO54804 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ChkaO54804 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms