Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DffbO54788 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DffbO54788 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DffbO54788 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.35■□□□□ 0.21
DffbO54788 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
DffbO54788 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
DffbO54788 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
DffbO54788 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.35■□□□□ 0.21
DffbO54788 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DffbO54788 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DffbO54788 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DffbO54788 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DffbO54788 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
DffbO54788 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DffbO54788 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
DffbO54788 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DffbO54788 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DffbO54788 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DffbO54788 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.34■□□□□ 0.21
DffbO54788 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DffbO54788 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.34■□□□□ 0.21
DffbO54788 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.34■□□□□ 0.21
DffbO54788 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.34■□□□□ 0.21
DffbO54788 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DffbO54788 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
DffbO54788 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
DffbO54788 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
DffbO54788 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DffbO54788 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.33■□□□□ 0.21
DffbO54788 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DffbO54788 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
DffbO54788 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DffbO54788 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
DffbO54788 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DffbO54788 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
DffbO54788 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DffbO54788 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
DffbO54788 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DffbO54788 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DffbO54788 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
DffbO54788 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
DffbO54788 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DffbO54788 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DffbO54788 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
DffbO54788 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DffbO54788 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
DffbO54788 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DffbO54788 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.32■□□□□ 0.2
DffbO54788 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.32■□□□□ 0.2
DffbO54788 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DffbO54788 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.32■□□□□ 0.2
DffbO54788 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.32■□□□□ 0.2
DffbO54788 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DffbO54788 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DffbO54788 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
DffbO54788 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DffbO54788 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DffbO54788 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
DffbO54788 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DffbO54788 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DffbO54788 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
DffbO54788 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DffbO54788 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DffbO54788 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DffbO54788 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DffbO54788 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
DffbO54788 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DffbO54788 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.31■□□□□ 0.2
DffbO54788 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.31■□□□□ 0.2
DffbO54788 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.31■□□□□ 0.2
DffbO54788 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
DffbO54788 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DffbO54788 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DffbO54788 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DffbO54788 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DffbO54788 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DffbO54788 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DffbO54788 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DffbO54788 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DffbO54788 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.3■□□□□ 0.2
DffbO54788 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
DffbO54788 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
DffbO54788 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.3■□□□□ 0.2
DffbO54788 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DffbO54788 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.3■□□□□ 0.2
DffbO54788 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.3■□□□□ 0.2
DffbO54788 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DffbO54788 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DffbO54788 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DffbO54788 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DffbO54788 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DffbO54788 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.3■□□□□ 0.2
DffbO54788 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DffbO54788 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DffbO54788 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms