Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.18■□□□□ 0.5
Abca4O35600 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Abca4O35600 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Abca4O35600 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.18■□□□□ 0.5
Abca4O35600 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.18■□□□□ 0.5
Abca4O35600 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abca4O35600 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.17■□□□□ 0.5
Abca4O35600 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.17■□□□□ 0.5
Abca4O35600 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abca4O35600 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abca4O35600 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abca4O35600 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abca4O35600 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Abca4O35600 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Abca4O35600 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Abca4O35600 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.16■□□□□ 0.5
Abca4O35600 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Abca4O35600 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abca4O35600 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Abca4O35600 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Abca4O35600 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Abca4O35600 AA414768-201ENSMUST00000121924 1257 ntBASIC18.15■□□□□ 0.5
Abca4O35600 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.15■□□□□ 0.5
Abca4O35600 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Abca4O35600 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Abca4O35600 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Abca4O35600 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Abca4O35600 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abca4O35600 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abca4O35600 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Abca4O35600 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Abca4O35600 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Abca4O35600 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abca4O35600 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Abca4O35600 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Abca4O35600 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.14■□□□□ 0.49
Abca4O35600 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Abca4O35600 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abca4O35600 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abca4O35600 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abca4O35600 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abca4O35600 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Abca4O35600 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Abca4O35600 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abca4O35600 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abca4O35600 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Abca4O35600 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Abca4O35600 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abca4O35600 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abca4O35600 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abca4O35600 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abca4O35600 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Abca4O35600 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abca4O35600 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abca4O35600 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abca4O35600 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.11■□□□□ 0.49
Abca4O35600 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abca4O35600 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abca4O35600 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Abca4O35600 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Abca4O35600 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abca4O35600 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abca4O35600 Gm18032-201ENSMUST00000222541 538 ntBASIC18.11■□□□□ 0.49
Abca4O35600 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abca4O35600 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Abca4O35600 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Abca4O35600 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abca4O35600 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.1■□□□□ 0.49
Abca4O35600 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Abca4O35600 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abca4O35600 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abca4O35600 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abca4O35600 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.1■□□□□ 0.49
Abca4O35600 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abca4O35600 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Abca4O35600 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Abca4O35600 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abca4O35600 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Abca4O35600 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.09■□□□□ 0.49
Abca4O35600 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abca4O35600 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.09■□□□□ 0.49
Abca4O35600 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abca4O35600 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.09■□□□□ 0.49
Abca4O35600 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abca4O35600 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
Abca4O35600 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Abca4O35600 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Abca4O35600 Odf3b-204ENSMUST00000227834 930 ntBASIC18.09■□□□□ 0.49
Abca4O35600 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Abca4O35600 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Abca4O35600 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Abca4O35600 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abca4O35600 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abca4O35600 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abca4O35600 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Abca4O35600 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abca4O35600 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abca4O35600 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Abca4O35600 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abca4O35600 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms