Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11aO35305 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.67■□□□□ 0.9
Tnfrsf11aO35305 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.67■□□□□ 0.9
Tnfrsf11aO35305 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11aO35305 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11aO35305 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11aO35305 Gm7860-201ENSMUST00000121190 879 ntBASIC20.66■□□□□ 0.9
Tnfrsf11aO35305 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.66■□□□□ 0.9
Tnfrsf11aO35305 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.66■□□□□ 0.9
Tnfrsf11aO35305 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.66■□□□□ 0.9
Tnfrsf11aO35305 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11aO35305 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11aO35305 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11aO35305 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11aO35305 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11aO35305 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf11aO35305 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf11aO35305 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf11aO35305 Gm38205-201ENSMUST00000192243 258 ntBASIC20.65■□□□□ 0.9
Tnfrsf11aO35305 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf11aO35305 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf11aO35305 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf11aO35305 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnfrsf11aO35305 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf11aO35305 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf11aO35305 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf11aO35305 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf11aO35305 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11aO35305 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11aO35305 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Gm9988-201ENSMUST00000069786 435 ntBASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Reep4-203ENSMUST00000226563 1444 ntBASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Tnfrsf11aO35305 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf11aO35305 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf11aO35305 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf11aO35305 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf11aO35305 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf11aO35305 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.6■□□□□ 0.89
Tnfrsf11aO35305 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf11aO35305 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Tnfrsf11aO35305 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf11aO35305 Gm10493-201ENSMUST00000097270 612 ntBASIC20.6■□□□□ 0.89
Tnfrsf11aO35305 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.6■□□□□ 0.89
Tnfrsf11aO35305 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf11aO35305 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms