Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.33□□□□□ -0.44
Pkd1O08852 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.33□□□□□ -0.44
Pkd1O08852 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pkd1O08852 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.33□□□□□ -0.44
Pkd1O08852 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pkd1O08852 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Pkd1O08852 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pkd1O08852 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pkd1O08852 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.32□□□□□ -0.44
Pkd1O08852 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pkd1O08852 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pkd1O08852 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pkd1O08852 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pkd1O08852 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pkd1O08852 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.32□□□□□ -0.44
Pkd1O08852 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pkd1O08852 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pkd1O08852 AA386476-201ENSMUST00000098781 1665 ntBASIC12.32□□□□□ -0.44
Pkd1O08852 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pkd1O08852 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pkd1O08852 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pkd1O08852 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pkd1O08852 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pkd1O08852 Gm2399-201ENSMUST00000104944 225 ntBASIC12.31□□□□□ -0.44
Pkd1O08852 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pkd1O08852 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.31□□□□□ -0.44
Pkd1O08852 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pkd1O08852 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pkd1O08852 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pkd1O08852 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pkd1O08852 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pkd1O08852 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pkd1O08852 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pkd1O08852 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pkd1O08852 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pkd1O08852 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pkd1O08852 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pkd1O08852 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pkd1O08852 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pkd1O08852 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pkd1O08852 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pkd1O08852 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pkd1O08852 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pkd1O08852 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pkd1O08852 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pkd1O08852 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pkd1O08852 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pkd1O08852 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.3□□□□□ -0.44
Pkd1O08852 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pkd1O08852 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pkd1O08852 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pkd1O08852 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pkd1O08852 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
Pkd1O08852 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pkd1O08852 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pkd1O08852 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pkd1O08852 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pkd1O08852 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pkd1O08852 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pkd1O08852 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Pkd1O08852 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Pkd1O08852 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.29□□□□□ -0.44
Pkd1O08852 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.29□□□□□ -0.44
Pkd1O08852 Gm6802-201ENSMUST00000167843 1983 ntBASIC12.29□□□□□ -0.44
Pkd1O08852 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC12.29□□□□□ -0.44
Pkd1O08852 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Pkd1O08852 Gm18666-201ENSMUST00000190039 958 ntBASIC12.28□□□□□ -0.44
Pkd1O08852 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pkd1O08852 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pkd1O08852 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pkd1O08852 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pkd1O08852 Dmtn-209ENSMUST00000228295 2572 ntBASIC12.28□□□□□ -0.44
Pkd1O08852 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.28□□□□□ -0.44
Pkd1O08852 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pkd1O08852 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pkd1O08852 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pkd1O08852 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pkd1O08852 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC12.28□□□□□ -0.44
Pkd1O08852 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pkd1O08852 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pkd1O08852 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pkd1O08852 Gm32051-202ENSMUST00000197905 2385 ntBASIC12.27□□□□□ -0.44
Pkd1O08852 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pkd1O08852 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Pkd1O08852 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pkd1O08852 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pkd1O08852 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pkd1O08852 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pkd1O08852 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.27□□□□□ -0.45
Pkd1O08852 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pkd1O08852 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pkd1O08852 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pkd1O08852 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pkd1O08852 Gm10517-202ENSMUST00000192970 758 ntBASIC12.27□□□□□ -0.45
Pkd1O08852 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Pkd1O08852 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.27□□□□□ -0.45
Pkd1O08852 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pkd1O08852 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pkd1O08852 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Pkd1O08852 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms