Protein–RNA interactions for Protein: G5E861

Sclt1, Sodium channel and clathrin linker 1, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sclt1G5E861 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sclt1G5E861 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sclt1G5E861 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sclt1G5E861 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sclt1G5E861 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sclt1G5E861 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sclt1G5E861 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sclt1G5E861 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.5■□□□□ 0.87
Sclt1G5E861 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sclt1G5E861 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sclt1G5E861 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sclt1G5E861 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sclt1G5E861 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sclt1G5E861 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sclt1G5E861 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.49■□□□□ 0.87
Sclt1G5E861 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sclt1G5E861 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Sclt1G5E861 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sclt1G5E861 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sclt1G5E861 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Sclt1G5E861 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.49■□□□□ 0.87
Sclt1G5E861 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sclt1G5E861 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Sclt1G5E861 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sclt1G5E861 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sclt1G5E861 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sclt1G5E861 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sclt1G5E861 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sclt1G5E861 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sclt1G5E861 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Sclt1G5E861 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sclt1G5E861 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.48■□□□□ 0.87
Sclt1G5E861 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sclt1G5E861 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Sclt1G5E861 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.48■□□□□ 0.87
Sclt1G5E861 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sclt1G5E861 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sclt1G5E861 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.48■□□□□ 0.87
Sclt1G5E861 Golph3-205ENSMUST00000228671 2842 ntBASIC20.48■□□□□ 0.87
Sclt1G5E861 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.47■□□□□ 0.87
Sclt1G5E861 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sclt1G5E861 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sclt1G5E861 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sclt1G5E861 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Sclt1G5E861 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.47■□□□□ 0.87
Sclt1G5E861 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sclt1G5E861 Gm27454-201ENSMUST00000185090 204 ntBASIC20.47■□□□□ 0.87
Sclt1G5E861 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.47■□□□□ 0.87
Sclt1G5E861 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.47■□□□□ 0.87
Sclt1G5E861 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sclt1G5E861 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sclt1G5E861 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.47■□□□□ 0.87
Sclt1G5E861 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Sclt1G5E861 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sclt1G5E861 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sclt1G5E861 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sclt1G5E861 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sclt1G5E861 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sclt1G5E861 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sclt1G5E861 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sclt1G5E861 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Sclt1G5E861 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.46■□□□□ 0.87
Sclt1G5E861 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.46■□□□□ 0.87
Sclt1G5E861 Gm8493-201ENSMUST00000196881 489 ntBASIC20.46■□□□□ 0.87
Sclt1G5E861 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sclt1G5E861 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sclt1G5E861 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Sclt1G5E861 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Sclt1G5E861 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.46■□□□□ 0.87
Sclt1G5E861 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Sclt1G5E861 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sclt1G5E861 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sclt1G5E861 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sclt1G5E861 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sclt1G5E861 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.45■□□□□ 0.86
Sclt1G5E861 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sclt1G5E861 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.45■□□□□ 0.86
Sclt1G5E861 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sclt1G5E861 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sclt1G5E861 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sclt1G5E861 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Sclt1G5E861 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Sclt1G5E861 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sclt1G5E861 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
Sclt1G5E861 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sclt1G5E861 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sclt1G5E861 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sclt1G5E861 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sclt1G5E861 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sclt1G5E861 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sclt1G5E861 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.44■□□□□ 0.86
Sclt1G5E861 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sclt1G5E861 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sclt1G5E861 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sclt1G5E861 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sclt1G5E861 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sclt1G5E861 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sclt1G5E861 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sclt1G5E861 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sclt1G5E861 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms