Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Colca2F8VPY8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Colca2F8VPY8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Colca2F8VPY8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Colca2F8VPY8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Colca2F8VPY8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Colca2F8VPY8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Colca2F8VPY8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Colca2F8VPY8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Colca2F8VPY8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.35■□□□□ 0.53
Colca2F8VPY8 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.35■□□□□ 0.53
Colca2F8VPY8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Colca2F8VPY8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Colca2F8VPY8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Colca2F8VPY8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.35■□□□□ 0.53
Colca2F8VPY8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Colca2F8VPY8 Gm2399-201ENSMUST00000104944 225 ntBASIC18.35■□□□□ 0.53
Colca2F8VPY8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.35■□□□□ 0.53
Colca2F8VPY8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Colca2F8VPY8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Colca2F8VPY8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Colca2F8VPY8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Colca2F8VPY8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Colca2F8VPY8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Colca2F8VPY8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Colca2F8VPY8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Colca2F8VPY8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.34■□□□□ 0.53
Colca2F8VPY8 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.34■□□□□ 0.53
Colca2F8VPY8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Colca2F8VPY8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Colca2F8VPY8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Colca2F8VPY8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Colca2F8VPY8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Colca2F8VPY8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Colca2F8VPY8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Colca2F8VPY8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Colca2F8VPY8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Colca2F8VPY8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Colca2F8VPY8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Colca2F8VPY8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Colca2F8VPY8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Colca2F8VPY8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Colca2F8VPY8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Colca2F8VPY8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Colca2F8VPY8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.32■□□□□ 0.52
Colca2F8VPY8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.32■□□□□ 0.52
Colca2F8VPY8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.32■□□□□ 0.52
Colca2F8VPY8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.32■□□□□ 0.52
Colca2F8VPY8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.32■□□□□ 0.52
Colca2F8VPY8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Colca2F8VPY8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Colca2F8VPY8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Colca2F8VPY8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Colca2F8VPY8 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.31■□□□□ 0.52
Colca2F8VPY8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Colca2F8VPY8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.31■□□□□ 0.52
Colca2F8VPY8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.31■□□□□ 0.52
Colca2F8VPY8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.31■□□□□ 0.52
Colca2F8VPY8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.31■□□□□ 0.52
Colca2F8VPY8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Colca2F8VPY8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Colca2F8VPY8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Colca2F8VPY8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Colca2F8VPY8 Gm13158-201ENSMUST00000122007 736 ntBASIC18.3■□□□□ 0.52
Colca2F8VPY8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.3■□□□□ 0.52
Colca2F8VPY8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Colca2F8VPY8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Colca2F8VPY8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.3■□□□□ 0.52
Colca2F8VPY8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Colca2F8VPY8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Colca2F8VPY8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.29■□□□□ 0.52
Colca2F8VPY8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Colca2F8VPY8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Colca2F8VPY8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.29■□□□□ 0.52
Colca2F8VPY8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.29■□□□□ 0.52
Colca2F8VPY8 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.29■□□□□ 0.52
Colca2F8VPY8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Colca2F8VPY8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Colca2F8VPY8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Colca2F8VPY8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Colca2F8VPY8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Colca2F8VPY8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.29■□□□□ 0.52
Colca2F8VPY8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Colca2F8VPY8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Colca2F8VPY8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Colca2F8VPY8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.28■□□□□ 0.52
Colca2F8VPY8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Colca2F8VPY8 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.28■□□□□ 0.52
Colca2F8VPY8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Colca2F8VPY8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Colca2F8VPY8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Colca2F8VPY8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Colca2F8VPY8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Colca2F8VPY8 Gm9987-201ENSMUST00000069768 567 ntBASIC18.28■□□□□ 0.52
Colca2F8VPY8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Colca2F8VPY8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Colca2F8VPY8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.28■□□□□ 0.52
Colca2F8VPY8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Colca2F8VPY8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.28■□□□□ 0.52
Colca2F8VPY8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms