Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.19■□□□□ 0.34
Pcdh1F7BJK1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh1F7BJK1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh1F7BJK1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh1F7BJK1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh1F7BJK1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh1F7BJK1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh1F7BJK1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh1F7BJK1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh1F7BJK1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdh1F7BJK1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh1F7BJK1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh1F7BJK1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh1F7BJK1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh1F7BJK1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdh1F7BJK1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh1F7BJK1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh1F7BJK1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Gm14117-201ENSMUST00000122417 843 ntBASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh1F7BJK1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Serp2-204ENSMUST00000228055 705 ntBASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh1F7BJK1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
Pcdh1F7BJK1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdh1F7BJK1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh1F7BJK1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh1F7BJK1 Gm22238-201ENSMUST00000175222 88 ntBASIC17.14■□□□□ 0.33
Pcdh1F7BJK1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh1F7BJK1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.14■□□□□ 0.33
Pcdh1F7BJK1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.14■□□□□ 0.33
Pcdh1F7BJK1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh1F7BJK1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh1F7BJK1 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.14■□□□□ 0.33
Pcdh1F7BJK1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh1F7BJK1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh1F7BJK1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh1F7BJK1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdh1F7BJK1 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.13■□□□□ 0.33
Pcdh1F7BJK1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh1F7BJK1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh1F7BJK1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdh1F7BJK1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.13■□□□□ 0.33
Pcdh1F7BJK1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Pcdh1F7BJK1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh1F7BJK1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh1F7BJK1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh1F7BJK1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh1F7BJK1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh1F7BJK1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh1F7BJK1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh1F7BJK1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh1F7BJK1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdh1F7BJK1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdh1F7BJK1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 147.3 ms