Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.88■□□□□ 0.61
Cdr1E9Q0B4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdr1E9Q0B4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdr1E9Q0B4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdr1E9Q0B4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.87■□□□□ 0.61
Cdr1E9Q0B4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdr1E9Q0B4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdr1E9Q0B4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
Cdr1E9Q0B4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdr1E9Q0B4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.87■□□□□ 0.61
Cdr1E9Q0B4 Gm27502-201ENSMUST00000183495 199 ntBASIC18.87■□□□□ 0.61
Cdr1E9Q0B4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.87■□□□□ 0.61
Cdr1E9Q0B4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdr1E9Q0B4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdr1E9Q0B4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdr1E9Q0B4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdr1E9Q0B4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cdr1E9Q0B4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cdr1E9Q0B4 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Mir6236-201ENSMUST00000184437 123 ntBASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdr1E9Q0B4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdr1E9Q0B4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdr1E9Q0B4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdr1E9Q0B4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdr1E9Q0B4 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.84■□□□□ 0.61
Cdr1E9Q0B4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdr1E9Q0B4 Gm7332-201ENSMUST00000118351 454 ntBASIC18.84■□□□□ 0.61
Cdr1E9Q0B4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Cdr1E9Q0B4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cdr1E9Q0B4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdr1E9Q0B4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cdr1E9Q0B4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cdr1E9Q0B4 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.84■□□□□ 0.61
Cdr1E9Q0B4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdr1E9Q0B4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cdr1E9Q0B4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Cdr1E9Q0B4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdr1E9Q0B4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdr1E9Q0B4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdr1E9Q0B4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.83■□□□□ 0.61
Cdr1E9Q0B4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cdr1E9Q0B4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdr1E9Q0B4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdr1E9Q0B4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdr1E9Q0B4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdr1E9Q0B4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdr1E9Q0B4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdr1E9Q0B4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cdr1E9Q0B4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdr1E9Q0B4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Cdr1E9Q0B4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdr1E9Q0B4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cdr1E9Q0B4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdr1E9Q0B4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdr1E9Q0B4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdr1E9Q0B4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cdr1E9Q0B4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.82■□□□□ 0.6
Cdr1E9Q0B4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdr1E9Q0B4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdr1E9Q0B4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Cdr1E9Q0B4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cdr1E9Q0B4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdr1E9Q0B4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdr1E9Q0B4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdr1E9Q0B4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdr1E9Q0B4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.81■□□□□ 0.6
Cdr1E9Q0B4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cdr1E9Q0B4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdr1E9Q0B4 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.81■□□□□ 0.6
Cdr1E9Q0B4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms