Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a3E9PWQ3 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.5■□□□□ 0.71
Col6a3E9PWQ3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a3E9PWQ3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a3E9PWQ3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col6a3E9PWQ3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Col6a3E9PWQ3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.49■□□□□ 0.71
Col6a3E9PWQ3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col6a3E9PWQ3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col6a3E9PWQ3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col6a3E9PWQ3 Gm7153-201ENSMUST00000117092 455 ntBASIC19.49■□□□□ 0.71
Col6a3E9PWQ3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.49■□□□□ 0.71
Col6a3E9PWQ3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col6a3E9PWQ3 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.49■□□□□ 0.71
Col6a3E9PWQ3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col6a3E9PWQ3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col6a3E9PWQ3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col6a3E9PWQ3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col6a3E9PWQ3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col6a3E9PWQ3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.48■□□□□ 0.71
Col6a3E9PWQ3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col6a3E9PWQ3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col6a3E9PWQ3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col6a3E9PWQ3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Col6a3E9PWQ3 Gm6443-201ENSMUST00000203599 874 ntBASIC19.48■□□□□ 0.71
Col6a3E9PWQ3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col6a3E9PWQ3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col6a3E9PWQ3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.47■□□□□ 0.71
Col6a3E9PWQ3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.47■□□□□ 0.71
Col6a3E9PWQ3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.47■□□□□ 0.71
Col6a3E9PWQ3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col6a3E9PWQ3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col6a3E9PWQ3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col6a3E9PWQ3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col6a3E9PWQ3 AW822252-206ENSMUST00000208904 237 ntBASIC19.47■□□□□ 0.71
Col6a3E9PWQ3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col6a3E9PWQ3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col6a3E9PWQ3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.46■□□□□ 0.71
Col6a3E9PWQ3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col6a3E9PWQ3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a3E9PWQ3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a3E9PWQ3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a3E9PWQ3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a3E9PWQ3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a3E9PWQ3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a3E9PWQ3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.45■□□□□ 0.7
Col6a3E9PWQ3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a3E9PWQ3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a3E9PWQ3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a3E9PWQ3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a3E9PWQ3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a3E9PWQ3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a3E9PWQ3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.44■□□□□ 0.7
Col6a3E9PWQ3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.44■□□□□ 0.7
Col6a3E9PWQ3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a3E9PWQ3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a3E9PWQ3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a3E9PWQ3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
Col6a3E9PWQ3 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.44■□□□□ 0.7
Col6a3E9PWQ3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Col6a3E9PWQ3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a3E9PWQ3 Gm13158-201ENSMUST00000122007 736 ntBASIC19.43■□□□□ 0.7
Col6a3E9PWQ3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.43■□□□□ 0.7
Col6a3E9PWQ3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a3E9PWQ3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.43■□□□□ 0.7
Col6a3E9PWQ3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a3E9PWQ3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Col6a3E9PWQ3 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.43■□□□□ 0.7
Col6a3E9PWQ3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.43■□□□□ 0.7
Col6a3E9PWQ3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.43■□□□□ 0.7
Col6a3E9PWQ3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.42■□□□□ 0.7
Col6a3E9PWQ3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Col6a3E9PWQ3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a3E9PWQ3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a3E9PWQ3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a3E9PWQ3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a3E9PWQ3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a3E9PWQ3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.42■□□□□ 0.7
Col6a3E9PWQ3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a3E9PWQ3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a3E9PWQ3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a3E9PWQ3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Col6a3E9PWQ3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a3E9PWQ3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.41■□□□□ 0.7
Col6a3E9PWQ3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a3E9PWQ3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Col6a3E9PWQ3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a3E9PWQ3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a3E9PWQ3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a3E9PWQ3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a3E9PWQ3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a3E9PWQ3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a3E9PWQ3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a3E9PWQ3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a3E9PWQ3 Gm18032-201ENSMUST00000222541 538 ntBASIC19.4■□□□□ 0.7
Col6a3E9PWQ3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Col6a3E9PWQ3 Gm44549-201ENSMUST00000208351 577 ntBASIC19.39■□□□□ 0.69
Col6a3E9PWQ3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Col6a3E9PWQ3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col6a3E9PWQ3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms