Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Mir6236-201ENSMUST00000184437 123 ntBASIC20.77■□□□□ 0.92
Trim30cD3YVI9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim30cD3YVI9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim30cD3YVI9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim30cD3YVI9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim30cD3YVI9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim30cD3YVI9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trim30cD3YVI9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim30cD3YVI9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim30cD3YVI9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim30cD3YVI9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Trim30cD3YVI9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim30cD3YVI9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim30cD3YVI9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim30cD3YVI9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim30cD3YVI9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim30cD3YVI9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Trim30cD3YVI9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim30cD3YVI9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.75■□□□□ 0.91
Trim30cD3YVI9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim30cD3YVI9 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.75■□□□□ 0.91
Trim30cD3YVI9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim30cD3YVI9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim30cD3YVI9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim30cD3YVI9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim30cD3YVI9 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.75■□□□□ 0.91
Trim30cD3YVI9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim30cD3YVI9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim30cD3YVI9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim30cD3YVI9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim30cD3YVI9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim30cD3YVI9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim30cD3YVI9 Gm12251-201ENSMUST00000117893 792 ntBASIC20.74■□□□□ 0.91
Trim30cD3YVI9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim30cD3YVI9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.74■□□□□ 0.91
Trim30cD3YVI9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim30cD3YVI9 Gm8493-201ENSMUST00000196881 489 ntBASIC20.74■□□□□ 0.91
Trim30cD3YVI9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.74■□□□□ 0.91
Trim30cD3YVI9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Serp2-204ENSMUST00000228055 705 ntBASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Trim30cD3YVI9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim30cD3YVI9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim30cD3YVI9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim30cD3YVI9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trim30cD3YVI9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim30cD3YVI9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim30cD3YVI9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trim30cD3YVI9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
Trim30cD3YVI9 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.71■□□□□ 0.91
Trim30cD3YVI9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trim30cD3YVI9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim30cD3YVI9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Trim30cD3YVI9 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.71■□□□□ 0.91
Trim30cD3YVI9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim30cD3YVI9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.71■□□□□ 0.91
Trim30cD3YVI9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim30cD3YVI9 Spcs1-204ENSMUST00000226782 949 ntBASIC20.71■□□□□ 0.91
Trim30cD3YVI9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
Trim30cD3YVI9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim30cD3YVI9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim30cD3YVI9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim30cD3YVI9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim30cD3YVI9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trim30cD3YVI9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trim30cD3YVI9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trim30cD3YVI9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim30cD3YVI9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim30cD3YVI9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trim30cD3YVI9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim30cD3YVI9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trim30cD3YVI9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim30cD3YVI9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.7■□□□□ 0.9
Trim30cD3YVI9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Trim30cD3YVI9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.7■□□□□ 0.9
Trim30cD3YVI9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim30cD3YVI9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms