Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a6B1AVK5 Gm2559-201ENSMUST00000201323 363 ntBASIC20.01■□□□□ 0.79
Col4a6B1AVK5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a6B1AVK5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a6B1AVK5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a6B1AVK5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a6B1AVK5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a6B1AVK5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a6B1AVK5 Gm715-201ENSMUST00000117865 831 ntBASIC20■□□□□ 0.79
Col4a6B1AVK5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Col4a6B1AVK5 Gm11249-201ENSMUST00000117071 859 ntBASIC20■□□□□ 0.79
Col4a6B1AVK5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20■□□□□ 0.79
Col4a6B1AVK5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20■□□□□ 0.79
Col4a6B1AVK5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Col4a6B1AVK5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col4a6B1AVK5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20■□□□□ 0.79
Col4a6B1AVK5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a6B1AVK5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a6B1AVK5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20■□□□□ 0.79
Col4a6B1AVK5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a6B1AVK5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Col4a6B1AVK5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a6B1AVK5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.99■□□□□ 0.79
Col4a6B1AVK5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a6B1AVK5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a6B1AVK5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Col4a6B1AVK5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a6B1AVK5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a6B1AVK5 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.98■□□□□ 0.79
Col4a6B1AVK5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a6B1AVK5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a6B1AVK5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.98■□□□□ 0.79
Col4a6B1AVK5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a6B1AVK5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a6B1AVK5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.98■□□□□ 0.79
Col4a6B1AVK5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Col4a6B1AVK5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a6B1AVK5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.97■□□□□ 0.79
Col4a6B1AVK5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Col4a6B1AVK5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a6B1AVK5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.97■□□□□ 0.79
Col4a6B1AVK5 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.97■□□□□ 0.79
Col4a6B1AVK5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.97■□□□□ 0.79
Col4a6B1AVK5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a6B1AVK5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a6B1AVK5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.97■□□□□ 0.79
Col4a6B1AVK5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a6B1AVK5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a6B1AVK5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a6B1AVK5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a6B1AVK5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a6B1AVK5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a6B1AVK5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a6B1AVK5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a6B1AVK5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Col4a6B1AVK5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a6B1AVK5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Col4a6B1AVK5 Gm6576-201ENSMUST00000169678 883 ntBASIC19.96■□□□□ 0.79
Col4a6B1AVK5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a6B1AVK5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Col4a6B1AVK5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.95■□□□□ 0.78
Col4a6B1AVK5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a6B1AVK5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Col4a6B1AVK5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a6B1AVK5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a6B1AVK5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.94■□□□□ 0.78
Col4a6B1AVK5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.94■□□□□ 0.78
Col4a6B1AVK5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a6B1AVK5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a6B1AVK5 Gm44549-201ENSMUST00000208351 577 ntBASIC19.94■□□□□ 0.78
Col4a6B1AVK5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a6B1AVK5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a6B1AVK5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a6B1AVK5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a6B1AVK5 Gm2399-201ENSMUST00000104944 225 ntBASIC19.94■□□□□ 0.78
Col4a6B1AVK5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a6B1AVK5 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.94■□□□□ 0.78
Col4a6B1AVK5 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.94■□□□□ 0.78
Col4a6B1AVK5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a6B1AVK5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a6B1AVK5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a6B1AVK5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a6B1AVK5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a6B1AVK5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a6B1AVK5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a6B1AVK5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Col4a6B1AVK5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.93■□□□□ 0.78
Col4a6B1AVK5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a6B1AVK5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.92■□□□□ 0.78
Col4a6B1AVK5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a6B1AVK5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a6B1AVK5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a6B1AVK5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a6B1AVK5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a6B1AVK5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a6B1AVK5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a6B1AVK5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a6B1AVK5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.91■□□□□ 0.78
Col4a6B1AVK5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a6B1AVK5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms