Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd6A3KFM7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd6A3KFM7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.75■□□□□ 0.11
Chd6A3KFM7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd6A3KFM7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd6A3KFM7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chd6A3KFM7 Gm28033-201ENSMUST00000184224 96 ntBASIC15.75■□□□□ 0.11
Chd6A3KFM7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.75■□□□□ 0.11
Chd6A3KFM7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd6A3KFM7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Chd6A3KFM7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd6A3KFM7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Chd6A3KFM7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Chd6A3KFM7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.74■□□□□ 0.11
Chd6A3KFM7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd6A3KFM7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd6A3KFM7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd6A3KFM7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.74■□□□□ 0.11
Chd6A3KFM7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd6A3KFM7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd6A3KFM7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd6A3KFM7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chd6A3KFM7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd6A3KFM7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Chd6A3KFM7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd6A3KFM7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd6A3KFM7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd6A3KFM7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd6A3KFM7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd6A3KFM7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.73■□□□□ 0.11
Chd6A3KFM7 Gm11539-201ENSMUST00000119837 557 ntBASIC15.73■□□□□ 0.11
Chd6A3KFM7 Gm13436-201ENSMUST00000120418 567 ntBASIC15.73■□□□□ 0.11
Chd6A3KFM7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.73■□□□□ 0.11
Chd6A3KFM7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.73■□□□□ 0.11
Chd6A3KFM7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Chd6A3KFM7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.73■□□□□ 0.11
Chd6A3KFM7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd6A3KFM7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd6A3KFM7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd6A3KFM7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd6A3KFM7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd6A3KFM7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chd6A3KFM7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chd6A3KFM7 Gm43183-201ENSMUST00000200632 547 ntBASIC15.73■□□□□ 0.11
Chd6A3KFM7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd6A3KFM7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd6A3KFM7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.72■□□□□ 0.11
Chd6A3KFM7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.72■□□□□ 0.11
Chd6A3KFM7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.72■□□□□ 0.11
Chd6A3KFM7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd6A3KFM7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chd6A3KFM7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd6A3KFM7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd6A3KFM7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.72■□□□□ 0.11
Chd6A3KFM7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chd6A3KFM7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Chd6A3KFM7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chd6A3KFM7 Gm7063-201ENSMUST00000186840 981 ntBASIC15.71■□□□□ 0.11
Chd6A3KFM7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd6A3KFM7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Chd6A3KFM7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Chd6A3KFM7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd6A3KFM7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd6A3KFM7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Chd6A3KFM7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Chd6A3KFM7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Chd6A3KFM7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd6A3KFM7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.71■□□□□ 0.1
Chd6A3KFM7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.7■□□□□ 0.1
Chd6A3KFM7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd6A3KFM7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd6A3KFM7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd6A3KFM7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd6A3KFM7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd6A3KFM7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Chd6A3KFM7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.7■□□□□ 0.1
Chd6A3KFM7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.7■□□□□ 0.1
Chd6A3KFM7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd6A3KFM7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Chd6A3KFM7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd6A3KFM7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd6A3KFM7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd6A3KFM7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chd6A3KFM7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chd6A3KFM7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chd6A3KFM7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd6A3KFM7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd6A3KFM7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd6A3KFM7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chd6A3KFM7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd6A3KFM7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd6A3KFM7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd6A3KFM7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd6A3KFM7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd6A3KFM7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd6A3KFM7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd6A3KFM7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd6A3KFM7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chd6A3KFM7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms