Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.03□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv2-1A0A0G2JGB9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv2-1A0A0G2JGB9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.02□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Fst-202ENSMUST00000223640 2612 ntBASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC13.99□□□□□ -0.17
Trdv2-1A0A0G2JGB9 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms