Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav13d-4A0A0G2JFX3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.16□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 AA386476-201ENSMUST00000098781 1665 ntBASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-4A0A0G2JFX3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms