Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh7A0A0A6YY83 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.74■□□□□ 0.75
Pcdh7A0A0A6YY83 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.74■□□□□ 0.75
Pcdh7A0A0A6YY83 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh7A0A0A6YY83 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh7A0A0A6YY83 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh7A0A0A6YY83 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh7A0A0A6YY83 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh7A0A0A6YY83 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.73■□□□□ 0.75
Pcdh7A0A0A6YY83 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh7A0A0A6YY83 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh7A0A0A6YY83 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Pcdh7A0A0A6YY83 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh7A0A0A6YY83 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh7A0A0A6YY83 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.72■□□□□ 0.75
Pcdh7A0A0A6YY83 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh7A0A0A6YY83 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdh7A0A0A6YY83 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdh7A0A0A6YY83 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh7A0A0A6YY83 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdh7A0A0A6YY83 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdh7A0A0A6YY83 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh7A0A0A6YY83 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdh7A0A0A6YY83 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh7A0A0A6YY83 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.71■□□□□ 0.75
Pcdh7A0A0A6YY83 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdh7A0A0A6YY83 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdh7A0A0A6YY83 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh7A0A0A6YY83 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh7A0A0A6YY83 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh7A0A0A6YY83 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdh7A0A0A6YY83 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh7A0A0A6YY83 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh7A0A0A6YY83 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdh7A0A0A6YY83 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pcdh7A0A0A6YY83 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh7A0A0A6YY83 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh7A0A0A6YY83 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh7A0A0A6YY83 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh7A0A0A6YY83 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh7A0A0A6YY83 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh7A0A0A6YY83 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.69■□□□□ 0.74
Pcdh7A0A0A6YY83 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh7A0A0A6YY83 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh7A0A0A6YY83 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh7A0A0A6YY83 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh7A0A0A6YY83 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh7A0A0A6YY83 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh7A0A0A6YY83 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh7A0A0A6YY83 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh7A0A0A6YY83 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh7A0A0A6YY83 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh7A0A0A6YY83 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh7A0A0A6YY83 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.68■□□□□ 0.74
Pcdh7A0A0A6YY83 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh7A0A0A6YY83 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh7A0A0A6YY83 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh7A0A0A6YY83 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh7A0A0A6YY83 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh7A0A0A6YY83 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh7A0A0A6YY83 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh7A0A0A6YY83 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh7A0A0A6YY83 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh7A0A0A6YY83 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh7A0A0A6YY83 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh7A0A0A6YY83 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh7A0A0A6YY83 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh7A0A0A6YY83 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.66■□□□□ 0.74
Pcdh7A0A0A6YY83 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pcdh7A0A0A6YY83 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pcdh7A0A0A6YY83 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh7A0A0A6YY83 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh7A0A0A6YY83 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh7A0A0A6YY83 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh7A0A0A6YY83 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh7A0A0A6YY83 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdh7A0A0A6YY83 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh7A0A0A6YY83 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh7A0A0A6YY83 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh7A0A0A6YY83 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh7A0A0A6YY83 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdh7A0A0A6YY83 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh7A0A0A6YY83 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Pcdh7A0A0A6YY83 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms