Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-56A0A0A6YXG2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-56A0A0A6YXG2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-56A0A0A6YXG2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC12.82□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-56A0A0A6YXG2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Gm43182-201ENSMUST00000199476 2528 ntBASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Gm45102-201ENSMUST00000207427 857 ntBASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Rps24-207ENSMUST00000224568 714 ntBASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ighv1-56A0A0A6YXG2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms