Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv3-4A0A0A6YXF1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.91■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv3-4A0A0A6YXF1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.91■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.9■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv3-4A0A0A6YXF1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv3-4A0A0A6YXF1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ighv3-4A0A0A6YXF1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv3-4A0A0A6YXF1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.89■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Ighv3-4A0A0A6YXF1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv3-4A0A0A6YXF1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.87■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Mir7071-201ENSMUST00000184847 69 ntBASIC15.87■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.87■□□□□ 0.13
Ighv3-4A0A0A6YXF1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv3-4A0A0A6YXF1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.86■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms