Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav21-dv12A0A075B6C4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav21-dv12A0A075B6C4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav21-dv12A0A075B6C4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav21-dv12A0A075B6C4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav21-dv12A0A075B6C4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav21-dv12A0A075B6C4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav21-dv12A0A075B6C4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav21-dv12A0A075B6C4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav21-dv12A0A075B6C4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav21-dv12A0A075B6C4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav21-dv12A0A075B6C4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav21-dv12A0A075B6C4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Gm43137-201ENSMUST00000198052 594 ntBASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav21-dv12A0A075B6C4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav21-dv12A0A075B6C4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav21-dv12A0A075B6C4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav21-dv12A0A075B6C4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav21-dv12A0A075B6C4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav21-dv12A0A075B6C4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav21-dv12A0A075B6C4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.64□□□□□ -0.07
Trav21-dv12A0A075B6C4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav21-dv12A0A075B6C4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.64□□□□□ -0.07
Trav21-dv12A0A075B6C4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Trav21-dv12A0A075B6C4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav21-dv12A0A075B6C4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav21-dv12A0A075B6C4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav21-dv12A0A075B6C4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav21-dv12A0A075B6C4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav21-dv12A0A075B6C4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav21-dv12A0A075B6C4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav21-dv12A0A075B6C4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav21-dv12A0A075B6C4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav21-dv12A0A075B6C4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Trav21-dv12A0A075B6C4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav21-dv12A0A075B6C4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav21-dv12A0A075B6C4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav21-dv12A0A075B6C4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav21-dv12A0A075B6C4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav21-dv12A0A075B6C4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms