Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.23■□□□□ 0.19
Trav6n-7A0A075B6A6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-7A0A075B6A6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-7A0A075B6A6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav6n-7A0A075B6A6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav6n-7A0A075B6A6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-7A0A075B6A6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-7A0A075B6A6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6n-7A0A075B6A6 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 Gm9988-201ENSMUST00000069786 435 ntBASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav6n-7A0A075B6A6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6n-7A0A075B6A6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6n-7A0A075B6A6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6n-7A0A075B6A6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav6n-7A0A075B6A6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.21■□□□□ 0.19
Trav6n-7A0A075B6A6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav6n-7A0A075B6A6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6n-7A0A075B6A6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6n-7A0A075B6A6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6n-7A0A075B6A6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6n-7A0A075B6A6 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.21■□□□□ 0.19
Trav6n-7A0A075B6A6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.21■□□□□ 0.19
Trav6n-7A0A075B6A6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6n-7A0A075B6A6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6n-7A0A075B6A6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6n-7A0A075B6A6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav6n-7A0A075B6A6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Trav6n-7A0A075B6A6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-7A0A075B6A6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-7A0A075B6A6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-7A0A075B6A6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav6n-7A0A075B6A6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav6n-7A0A075B6A6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-7A0A075B6A6 Gm10493-201ENSMUST00000097270 612 ntBASIC16.2■□□□□ 0.18
Trav6n-7A0A075B6A6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav6n-7A0A075B6A6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-7A0A075B6A6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-7A0A075B6A6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Trav6n-7A0A075B6A6 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav6n-7A0A075B6A6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-7A0A075B6A6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-7A0A075B6A6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-7A0A075B6A6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-7A0A075B6A6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-7A0A075B6A6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-7A0A075B6A6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.17■□□□□ 0.18
Trav6n-7A0A075B6A6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Trav6n-7A0A075B6A6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-7A0A075B6A6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.17■□□□□ 0.18
Trav6n-7A0A075B6A6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-7A0A075B6A6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-7A0A075B6A6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-7A0A075B6A6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-7A0A075B6A6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-7A0A075B6A6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-7A0A075B6A6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms