Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.62■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.62■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.61■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.61■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.6■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.6■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Trav15-2-dv6-2A0A075B650 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Gm7417-201ENSMUST00000192950 473 ntBASIC15.58■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.58■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Rarb-207ENSMUST00000225921 2756 ntBASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms