Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Gm10616-201ENSMUST00000205285 2127 ntBASIC13.57□□□□□ -0.24
Trav13-1A0A075B644 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Gm27801-201ENSMUST00000184174 223 ntBASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-1A0A075B644 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-1A0A075B644 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Gm15043-201ENSMUST00000118843 1543 ntBASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-1A0A075B644 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-1A0A075B644 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-1A0A075B644 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-1A0A075B644 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav13-1A0A075B644 Gm26571-201ENSMUST00000181399 666 ntBASIC13.53□□□□□ -0.24
Trav13-1A0A075B644 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-1A0A075B644 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-1A0A075B644 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13-1A0A075B644 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav13-1A0A075B644 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.53□□□□□ -0.24
Trav13-1A0A075B644 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13-1A0A075B644 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13-1A0A075B644 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms