Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-2A0A075B638 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-2A0A075B638 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-2A0A075B638 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-2A0A075B638 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-2A0A075B638 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-2A0A075B638 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 296.5 ms